Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2304 |
Symbol | |
ID | 6143959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2334448 |
End bp | 2335329 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641617178 |
Product | putative DNA-binding transcriptional regulator |
Protein accession | YP_001744351 |
Protein GI | 170682677 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00791446 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACATCA CCCTCCGGCA GTTGGAAGTT TTTGCAGAAG TATTGAAAAG TGGATCAACC ACCCAGGCGT CGGTGATGCT GGCGTTGTCG CAATCAGCAG TGAGCGCAGC CTTGACCGAC CTGGAAGGGC AGCTTGGCGT GCAACTGTTT GATCGCGTGG GGAAAAGACT GGTTGTTAAT GAACACGGGC GGCTGCTCTA TCCGCGCGCG TTGGCACTGC TTGAACAGGC GGTTGAAATC GAACAACTGT TTCGCGAAGA CAACGGCGCG ATTCGTATCT ATGCCAGTAG TACCATCGGT AACTACATTC TGCCTGCAGT TATCGCCCGT TATCGCCATG ATTATCCGCA GTTGCCGATT GAACTTAGCG TTGGGAATAG CCAGGACGTG ATGCAAGCGG TGCTGGATTT CCGCGTTGAT ATTGGCTTTA TTGAAGGACC GTGCCACAGC ACTGAAATCA TTTCTGAACC GTGGCTGGAA GACGAGCTGG TGGTTTTCGC CGCGCCGACT TCGCCGTTGG CTCGTGGTCC GGTCACCTTA GAACAGCTGG CCGCTGCGCC GTGGATCCTG CGTGAACGCG GTTCCGGCAC GCGGGAGATT GTCGATTATC TGTTGCTGTC ACATTTACCG AAGTTTGAGA TGGCGATGGA ATTAGGTAAC TCCGAGGCAA TCAAACATGC GGTGCGTCAT GGGTTGGGTA TTAGTTGCCT GTCGCGACGG GTGATTGAAG ATCAATTGCA GGCAGGCACA TTAAGTGAAG TTGCGGTCCC TCTTCCGCGC CTGATGCGTA CGTTGTGGCG TATACATCAT CGGCAAAAAC ACCTTTCCAA CGCGCTACGG CGCTTCCTGG ACTATTGCGA TCCCGCGAAT GTACCGCGTT AA
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Protein sequence | MHITLRQLEV FAEVLKSGST TQASVMLALS QSAVSAALTD LEGQLGVQLF DRVGKRLVVN EHGRLLYPRA LALLEQAVEI EQLFREDNGA IRIYASSTIG NYILPAVIAR YRHDYPQLPI ELSVGNSQDV MQAVLDFRVD IGFIEGPCHS TEIISEPWLE DELVVFAAPT SPLARGPVTL EQLAAAPWIL RERGSGTREI VDYLLLSHLP KFEMAMELGN SEAIKHAVRH GLGISCLSRR VIEDQLQAGT LSEVAVPLPR LMRTLWRIHH RQKHLSNALR RFLDYCDPAN VPR
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