Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2303 |
Symbol | lysP |
ID | 6146570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2332774 |
End bp | 2334243 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641617177 |
Product | lysine transporter |
Protein accession | YP_001744350 |
Protein GI | 170679799 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0833] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0126674 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTCCG AAACTAAAAC TACAGAAGCG CCGGGCTTAC GCCGTGAATT AAAGGCGCGT CACCTGACGA TGATTGCCAT TGGCGGTTCC ATCGGTACAG GTCTTTTTGT TGCCTCTGGC GCAACGATTT CTCAGGCAGG TCCGGGCGGG GCATTGCTCT CGTATATGCT GATTGGCCTG ATGGTTTACT TCCTGATGAC CAGTCTCGGT GAACTGGCTG CATATATGCC GGTTTCCGGT TCGTTTGCCA CTTACGGTCA GAACTATGTT GAAGAAGGCT TTGGCTTCGC GCTGGGCTGG AACTACTGGT ACAACTGGGC GGTGACTATC GCCGTTGACC TGGTTGCAGC TCAGCTGGTC ATGAGCTGGT GGTTCCCGGA TACACCGGGC TGGATCTGGA GTGCGCTGTT CCTCGGCGTT ATCTTCCTGC TGAACTACAT CTCAGTTCGT GGCTTTGGTG AAGCGGAATA CTGGTTCTCA CTGATCAAAG TCACGACAGT TATTGTCTTT ATCATCGTTG GCGTGCTGAT GATTATCGGT ATCTTCAAAG GCGCGCAGCC TGCGGGCTGG AGCAACTGGA CAATCGGCGA AGCGCCGTTT GCTGGTGGTT TTGCGGCGAT GATCGGCGTA GCTATGATTG TCGGCTTCTC TTTCCAGGGA ACCGAGCTGA TCGGTATTGC TGCAGGCGAG TCCGAAGATC CGGCGAAAAA CATTCCACGC GCGGTACGTC AGGTATTCTG GCGAATCCTG TTGTTCTATG TGTTCGCGAT CCTGATTATC AGCCTGATTA TTCCGTATAC CGATCCGAGC CTGCTGCGTA ACGATGTTAA AGACATCAGC GTCAGTCCGT TCACCCTGGT GTTCCAGCAC GCGGGTCTGC TCTCTGCGGC GGCGGTGATG AACGCAGTTA TTCTGACGGC GGTGCTGTCA GCGGGTAACT CCGGTATGTA TGCGTCTACT CGTATGCTGT ACACCCTGGC GTGTGACGGT AAAGCGCCGC GCATTTTCGC TAAACTGTCG CGTGGTGGCG TGCCGCGTAA TGCGCTGTAT GCGACGACGG TGATTGCAGG TCTGTGCTTC CTGACCTCCA TGTTTGGCAA CCAGACGGTA TACCTGTGGC TGCTGAACAC CTCCGGGATG ACCGGTTTTA TCGCCTGGCT GGGGATTGCC ATTAGCCACT ATCGTTTCCG TCGCGGGTAC GTATTGCAGG GACACGACAT TAACGATCTG CCGTACCGTT CAGGTTTCTT CCCACTGGGG CCGATCTTCG CATTCATTCT GTGTCTGATT ATCACTTTGG GCCAGAACTA CGAAGCGTTC CTGAAAGATA CCATTGACTG GGGCGGCGTA GCGGCAACGT ATATTGGTAT CCCGCTGTTC CTGATTATTT GGTTCGGATA CAAGCTGATT AAAGGAACTC ACTTCGTACG CTACAGCGAA ATGAAGTTCC CGCAGAACGA TAAGAAATAA
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Protein sequence | MGSETKTTEA PGLRRELKAR HLTMIAIGGS IGTGLFVASG ATISQAGPGG ALLSYMLIGL MVYFLMTSLG ELAAYMPVSG SFATYGQNYV EEGFGFALGW NYWYNWAVTI AVDLVAAQLV MSWWFPDTPG WIWSALFLGV IFLLNYISVR GFGEAEYWFS LIKVTTVIVF IIVGVLMIIG IFKGAQPAGW SNWTIGEAPF AGGFAAMIGV AMIVGFSFQG TELIGIAAGE SEDPAKNIPR AVRQVFWRIL LFYVFAILII SLIIPYTDPS LLRNDVKDIS VSPFTLVFQH AGLLSAAAVM NAVILTAVLS AGNSGMYAST RMLYTLACDG KAPRIFAKLS RGGVPRNALY ATTVIAGLCF LTSMFGNQTV YLWLLNTSGM TGFIAWLGIA ISHYRFRRGY VLQGHDINDL PYRSGFFPLG PIFAFILCLI ITLGQNYEAF LKDTIDWGGV AATYIGIPLF LIIWFGYKLI KGTHFVRYSE MKFPQNDKK
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