| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2302 |
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| Symbol | cirA |
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| ID | 6147114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2330491 |
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| End bp | 2332416 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617176 |
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| Product | colicin I receptor |
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| Protein accession | YP_001744349 |
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| Protein GI | 170682371 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.010442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAGCGG TCGATGATGA TGGCGAAACG ATGGTTGTCA CTGCATCTTC CGTTGAGCAA
AACCTTAAAG ATGCACCCGC CAGTATCAGC GTCATTACCC AGGAAGACCT GCAGCGAAAA
CCGGTACAGA ATCTGAAGGA TGTCCTCAAA GAAGTGCCTG GCGTACAACT GACGAACGAA
GGGGATAACC GTAAGGGCGT AAGTATTCGT GGTCTGGACA GCAGCTACAC CCTGATTCTT
GTCGACGGTA AACGCGTTAA CTCCCGCAAT GCCGTCTTCC GCCACAATGA TTTCGATCTG
AACTGGATCC CGGTCGATTC CATCGAACGT ATTGAAGTGG TCCGTGGCCC GATGTCGTCG
CTGTACGGTT CCGATGCGCT CGGCGGTGTA GTGAATATCA TCACCAAAAA AATCGGTCAG
AAATGGTCGG GCACCGTTAC CGTCGATACC ACCGTTCAGG AACATCGCGA TCGCGGTGAT
ACCTATAACG GTCAGTTCTT TACCAGCGGA CCATTAATTG ACGGCGTGCT GGGAATGAAA
GCTTACGGCA GCCTGGCAAA ACGTGAAAAG GATGACCCGC AAAACTCAAC GACCACCGAT
ACCGGAGAAA CGCCGCGTAT TGAAGGATTC TCCAGCCGCG ACGGCAATGT CGAATTTGCC
TGGACACCGA ATCAAAATCA CGATTTTACT GCCGGATACG GTTTCGACCG TCAGGATCGT
GATTCCGACT CGCTGGACAA AAACCGCCTG GAACGCCAGA ACTACTCCGT CAGCCATAAT
GGGCGTTGGG ATTACGGCAC CAGCGAACTG AAATACTACG GTGAGAAAGT CGAGAACAAA
AACCCTGGCT ACAGCAGCCC GATAACTTCC GAAAGCAATA CGGTCGACGG CAAATACACG
TTGCCGCTGA CGGCGATTAA TCAGTTTCTC ACGGTTGGCG GTGAATGGCG TCACGACAAA
CTTAGCGATG CGGTGAACCT GACCGGGGGA ACCAGCTCCA AAACGTCTGC CAGCCAGTAC
GCGCTGTTTG TGGAAGATGA ATGGCGGATC TTCGAGCCGC TGGCGCTGAC GACCGGCGTA
CGTATGGACG ATCATGAAAC CTACGGTGAA CACTGGAGTC CGCGTGCCTA CCTGGTTTAT
AACGCCACCG ACACCGTAAC GGTGAAAGGG GGCTGGGCGA CGGCATTTAA AGCGCCTTCT
CTGTTGCAAC TTAGCCCTGA CTGGACGAGC AATTCCTGCC GTGGCGCATG TAAGATTGTG
GGTAGCCCGG ATCTGAAACC AGAAACCAGC GAAAGTTGGG AACTGGGGCT TTACTACATG
GGCGAAGAAG GCTGGCTGGA AGGGGTTGAA TCCAGCGTTA CCGTTTTCCG TAACGATGTG
AAAGATCGTA TCAGCATTAG CCGTACGTCT GACGTCAACG CTGCACCGGG CTACCAAAAC
TTTGTCGGTT TTGAGACGGG CGCTAACGGA CGGCGCATAC CGGTATTTAG CTACTACAAC
GTTAACAAAG CTCGTATTCA GGGCGTGGAA ACCGAACTGA AAATTCCGTT CAACGATGAA
TGGAAACTGT CGATCAACTA CACCTACAAC GATGGTCGTG ATGTCAGCAA CGGCGAAAAC
AAACCGCTAT CCGATCTGCC GTTCCATACT GCTAACGGTA CGCTGGACTG GAAACCGCTG
GCGCTGGAAG ACTGGTCATT CTATGTTTCT GGTCACTATA CCGGGCAGAA ACGCGCCGAC
AGCGCGACGG CTAAAACACC GGGCGGTTAT ACCATCTGGA ATACCGGTGC GGCCTGGCAG
GTGACTAAAG ACGTCAAACT GCGCGCAGGC GTGCTGAACC TTGGCGACAA GGATCTCAGT
CGTGACGACT ACAGCTATAA CGAAGACGGA CGTCGTTACT TTATGGCAGT GGATTATCGC
TTCTGA
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| Protein sequence | MLAVDDDGET MVVTASSVEQ NLKDAPASIS VITQEDLQRK PVQNLKDVLK EVPGVQLTNE
GDNRKGVSIR GLDSSYTLIL VDGKRVNSRN AVFRHNDFDL NWIPVDSIER IEVVRGPMSS
LYGSDALGGV VNIITKKIGQ KWSGTVTVDT TVQEHRDRGD TYNGQFFTSG PLIDGVLGMK
AYGSLAKREK DDPQNSTTTD TGETPRIEGF SSRDGNVEFA WTPNQNHDFT AGYGFDRQDR
DSDSLDKNRL ERQNYSVSHN GRWDYGTSEL KYYGEKVENK NPGYSSPITS ESNTVDGKYT
LPLTAINQFL TVGGEWRHDK LSDAVNLTGG TSSKTSASQY ALFVEDEWRI FEPLALTTGV
RMDDHETYGE HWSPRAYLVY NATDTVTVKG GWATAFKAPS LLQLSPDWTS NSCRGACKIV
GSPDLKPETS ESWELGLYYM GEEGWLEGVE SSVTVFRNDV KDRISISRTS DVNAAPGYQN
FVGFETGANG RRIPVFSYYN VNKARIQGVE TELKIPFNDE WKLSINYTYN DGRDVSNGEN
KPLSDLPFHT ANGTLDWKPL ALEDWSFYVS GHYTGQKRAD SATAKTPGGY TIWNTGAAWQ
VTKDVKLRAG VLNLGDKDLS RDDYSYNEDG RRYFMAVDYR F
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