Gene EcSMS35_2296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2296 
SymbolmglA 
ID6144584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2323483 
End bp2325003 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content45% 
IMG OID641617170 
Productgalactose/methyl galaxtoside transporter ATP-binding protein 
Protein accessionYP_001744343 
Protein GI170679772 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0020685 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTCAGCT CAACGACTCC GTCTTCCGGG GAATACTTGT TGGAAATGAG CGGTATCAAC 
AAGTCTTTTC CTGGTGTTAA GGCACTTGAT AACGTTAATT TAAAAGTCCG GCCACATTCT
ATCCATGCAT TAATGGGGGA AAACGGCGCA GGAAAATCAA CATTATTAAA ATGCCTGTTT
GGTATTTATC AAAAAGACTC CGGCACCATT TTATTCCAGG GTAAAGAGAT CGATTTCCAT
TCTGCAAAAG AAGCGCTGGA AAATGGTATT TCGATGGTAC ACCAGGAGTT AAACCTGGTA
TTACAACGTT CGGTGATGGA TAACATGTGG CTGGGGCGAT ATCCCACCAA AGGCATGTTT
GTCGATCAGG ACAAAATGTA CCGCGAAACC AAAGCGATTT TTGATGAACT GGATATTGAT
ATCGATCCGC GTGCGCGCGT CGGCACATTA TCCGTTTCGC AAATGCAGAT GATCGAAATC
GCCAAAGCGT TTTCCTATAA CGCGAAAATT GTGATTATGG ATGAACCGAC TTCTTCGTTA
ACCGAAAAAG AGGTCAATCA TCTGTTCACT ATTATTCGTA AATTAAAAGA GCGCGGCTGC
GGTATTGTTT ATATCTCACA TAAAATGGAA GAAATCTTCC AGTTATGTGA TGAAGTTACC
GTATTGCGCG ACGGTCAGTG GATCGCCACC GAACCGCTGG CAGGGCTGAC GATGGACAAG
ATCATCGCCA TGATGGTTGG GCGTTCTCTT AACCAGCGTT TCCCTGACAA AGAAAACAAG
CCGGGCGAAG TGATTCTGGA AGTGCGTAAC CTGACGTCGC TGCGCCAGCC GTCGATCCGT
GATGTCTCGT TTGATCTGCA TAAAGGGGAG ATTCTCGGTA TAGCCGGTCT GGTGGGAGCG
AAACGTACCG ATATTGTTGA GACGTTATTT GGTATTCGCG AGAAATCGGC TGGCACCATT
ACGTTGCACG GCAAAAAGAT CAATAACCAT AATGCCAACG AAGCCATAAA CCACGGATTT
GCACTGGTAA CTGAAGAGCG CCGCTCAACG GGAATTTATG CCTATCTGGA TATTGGCTTT
AACTCGTTAA TTTCCAATAT TCGCAATTAC AAAAACAAAG TTGGCTTGCT GGATAATTCG
CGGATGAAAA GCGATACCCA GTGGGTCATT GATTCGATGC GGGTAAAAAC GCCAGGTCAT
CGGACGCAAA TAGGTTCGCT CTCCGGTGGT AATCAGCAAA AAGTGATTAT TGGTCGCTGG
CTGTTAACGC AACCAGAAAT ATTAATGCTC GATGAACCGA CGCGCGGTAT TGACGTTGGG
GCTAAGTTTG AGATTTATCA GTTAATTGCC GAACTGGCGA AGAAAGGCAA GGGGATTATT
ATTATCTCCT CTGAAATGCC TGAGTTGTTA GGGATAACAG ACCGTATTCT GGTCATGAGC
AATGGTCTCG TTTCCGGAAT TGTCGATACA AAAACAACAA CGCAAAACGA AATTCTGCGT
CTTGCGTCTT TGCACCTTTA A
 
Protein sequence
MVSSTTPSSG EYLLEMSGIN KSFPGVKALD NVNLKVRPHS IHALMGENGA GKSTLLKCLF 
GIYQKDSGTI LFQGKEIDFH SAKEALENGI SMVHQELNLV LQRSVMDNMW LGRYPTKGMF
VDQDKMYRET KAIFDELDID IDPRARVGTL SVSQMQMIEI AKAFSYNAKI VIMDEPTSSL
TEKEVNHLFT IIRKLKERGC GIVYISHKME EIFQLCDEVT VLRDGQWIAT EPLAGLTMDK
IIAMMVGRSL NQRFPDKENK PGEVILEVRN LTSLRQPSIR DVSFDLHKGE ILGIAGLVGA
KRTDIVETLF GIREKSAGTI TLHGKKINNH NANEAINHGF ALVTEERRST GIYAYLDIGF
NSLISNIRNY KNKVGLLDNS RMKSDTQWVI DSMRVKTPGH RTQIGSLSGG NQQKVIIGRW
LLTQPEILML DEPTRGIDVG AKFEIYQLIA ELAKKGKGII IISSEMPELL GITDRILVMS
NGLVSGIVDT KTTTQNEILR LASLHL