| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2293 |
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| Symbol | |
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| ID | 6143477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2319919 |
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| End bp | 2321157 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641617167 |
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| Product | putative oxidoreductase |
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| Protein accession | YP_001744340 |
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| Protein GI | 170683988 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.00262467 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCAAC AAAATTATCT GGATGAACTC ACTCCGGCTT TTACGCCTTT ACTGGCGATT
AAAGAAGCCT CTCGCTGTTT ATTATGCCAT GACGCCCCCT GTAGTCAGGC TTGTCCGGCG
CAAACTGACC CAGGGAAATT TATCCGCTCA ATTTATTTTC GTAATTTTAA AGGTGCTGCC
GAGACAATTC GTGAAAATAA TGCCCTCGGT GCCGTTTGTG CCAGAGTGTG CCCGACGGAG
AAATTATGCC AAAGCGGTTG TACACGTGCT GGTGTTGATA CTCCCATTGA TATCGGTCGC
TTACAGCGTT TTGTTACTGA TTTTGAACAA CAAACCGGGA TGGAAATTTA TCAGCCCGGT
ACTAAAACGC TCGGCAAAGT CGCCATTATT GGCGCGGGTC CTGCCGGATT GCAGGCCAGT
GTGACGCTGA CAAACCAGGG TTATGACGTC ACGATCTATG AGAAAGAAGC ACAACCCGGT
GGCTGGTTGC GTAACGGCAT TCCGCAATTC CGGTTACCGC AATCGGTGCT GGATGCAGAA
ATCGCCCGTA TAGAAAAAAT GGGCGTGACC ATTAAATGCA ATAACGAAAT CGGTAACACA
CTCACCCTGG AGCAGCTGAA AGCGGAAAAC CGCGCGGTAC TGGTCACCGT GGGGTTATCG
AGCGGTTCGG GGCTACCACT GTTTGAGCAT AGCGACGTTG AGATTGCCGT CGACTTCCTG
CAACGTGCAC GACAGGCGCA AGGCGATATC AGCATTCCAC AAAGCGCATT AATTATCGGC
GGCGGTGATG TCGCGATGGA CGTAGCCAGC ACGCTGAAAG TTCTCGGCTG TCAGGCAGTA
ACTTGCGTAG CGCGTGAAGA GTTAGATGAG TTTCCGGCAA GCGAAAAAGA GTTTGCCAGC
GCCCGGGAGC TGGGCGTTTC GATCATTGAT GGATTCACGC CAGTAGCCGT GGAAGGCAAT
AAAGTCACGT TTAAGCATGT ACGGTTACCG GGCGAACTGA CGATGGCGGC AGATAAAATT
ATTCTCGCCG TCGGTCAGCA TGCCAGACTG GATGCCTTTG CGGAGTTAGA GCCGCAGCGT
AACACCATCA ATACACAAAA TTACCAGACC CGCGATCCGC AAGTCTTTGC TGCTGGCGAT
ATTGTTGAGG GGGACAAAAC CGTGGTCTAT GCCGTGAAAA CCGGGAAAGA AGCCGCCGAG
GCGATTCATC ACTATTTAGA GGGAGCTTGC TCATGTTAA
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| Protein sequence | MPQQNYLDEL TPAFTPLLAI KEASRCLLCH DAPCSQACPA QTDPGKFIRS IYFRNFKGAA
ETIRENNALG AVCARVCPTE KLCQSGCTRA GVDTPIDIGR LQRFVTDFEQ QTGMEIYQPG
TKTLGKVAII GAGPAGLQAS VTLTNQGYDV TIYEKEAQPG GWLRNGIPQF RLPQSVLDAE
IARIEKMGVT IKCNNEIGNT LTLEQLKAEN RAVLVTVGLS SGSGLPLFEH SDVEIAVDFL
QRARQAQGDI SIPQSALIIG GGDVAMDVAS TLKVLGCQAV TCVAREELDE FPASEKEFAS
ARELGVSIID GFTPVAVEGN KVTFKHVRLP GELTMAADKI ILAVGQHARL DAFAELEPQR
NTINTQNYQT RDPQVFAAGD IVEGDKTVVY AVKTGKEAAE AIHHYLEGAC SC
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