| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2290 |
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| Symbol | cdd |
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| ID | 6143970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2317730 |
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| End bp | 2318614 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641617164 |
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| Product | cytidine deaminase |
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| Protein accession | YP_001744337 |
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| Protein GI | 170680352 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01355] cytidine deaminase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.00582387 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATCCAC GTTTTCAAAC CGCTTTTGCC CAACTTGCGG ATAACTTGCA ATCTGCACTG
GAACCTATTC TGGCAGACAA GTACTTCCCC GCTTTGTTGA CCGGGGAGCA AGTCTCATCG
CTGAAGAGCG CAACGGGCCT GGACGAAGAC GCGCTGGCAT TCGCACTACT TCCGCTGGCG
GCGGCCTGTG CGCGTACGCC ATTGTCGAAT TTTAATGTTG GCGCAATTGC GCGCGGTGTG
AGCGGAACCT GGTATTTCGG TGCCAATATG GAATTTATTG GTGCGACAAT GCAGCAAACC
GTTCATGCCG AACAAAGCGC GATCAGCCAC GCCTGGCTGA GTGGTGAAAA AGCGCTTGCA
GCCATCACCG TTAACTACAC GCCTTGTGGT CACTGCCGTC AGTTTATGAA TGAACTGAAC
AGCGGTCTGG ATCTGCGTAT TCATCTTCCG GGACGCGAGG CACACGCGCT GCGTGACTAT
CTACCGGATG CCTTTGGGCC GAAAGATCTG GAGATTAAAA CACTGCTGAT GGACGAGCAG
GATCACGGCT ATGCGCTGAC TGGTGATGCG CTTTCTCAGG CAGCGATTGC GGCGGCAAAC
CGTTCGCACA TGCCTTACAG TAAGTCGCCA AGCGGTGTCG CGCTGGAATG TAAAGACGGT
CGTATTTTCA GCGGCAGTTA CGCTGAAAAC GCCGCATTCA ACCCGACTCT GCCACCGTTG
CAGGGAGCGT TAATTCTATT GAATCTCAAG GGTTATGATT ACCCGGATAT CCAGCGCGCG
GTTCTGGCAG AAAAAGCCGA TGCGCCGTTG ATTCAGTGGG ATGCCACCTC CGCAACGCTG
AAAGCTCTCG GCTGTCACAG TATCGACCGC GTACTTCTCG CTTAA
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| Protein sequence | MHPRFQTAFA QLADNLQSAL EPILADKYFP ALLTGEQVSS LKSATGLDED ALAFALLPLA
AACARTPLSN FNVGAIARGV SGTWYFGANM EFIGATMQQT VHAEQSAISH AWLSGEKALA
AITVNYTPCG HCRQFMNELN SGLDLRIHLP GREAHALRDY LPDAFGPKDL EIKTLLMDEQ
DHGYALTGDA LSQAAIAAAN RSHMPYSKSP SGVALECKDG RIFSGSYAEN AAFNPTLPPL
QGALILLNLK GYDYPDIQRA VLAEKADAPL IQWDATSATL KALGCHSIDR VLLA
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