| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2287 |
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| Symbol | dusC |
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| ID | 6146561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2315324 |
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| End bp | 2316271 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617161 |
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| Product | tRNA-dihydrouridine synthase C |
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| Protein accession | YP_001744334 |
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| Protein GI | 170680883 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0065633 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTGTGT TACTGGCACC GATGGAGGGT GTACTCGACT CTCTGGTGCG TGAATTGCTG
ACCGAAGTTA ACGACTACGA TCTGTGCATC ACCGAGTTTG TCCGCGTGGT GGATCAACTG
CTGCCGGTAA AAGTCTTTCA TCGCATTTGC CCTGAGCTAC AAAACGCCAG CCGGACACCA
TCCGGTACGC TGGTGCGCGT GCAGTTGTTA GGTCAGTTCC CACAATGGCT GGCAGAGAAT
GCCGCCCGTG CGGTCGAGTT AGGTTCCTGG GGCGTGGATC TCAATTGCGG CTGCCCGTCG
AAAACGGTTA ACGGTAGCGG CGGTGGGGCG ACGTTACTCA AAGATCCTGA ACTCATCTAT
CAGGGTGCAA AAGCGATGCG CGAAGCTGTA CCGGCGCATT TGCCCGTCAG CGTAAAAGTG
CGTCTGGGCT GGGACAGCGG TGAGAAGAAA TTTGAAATCG CCGATGCGGT TCAACAGGCT
GGTGCTACAG AGCTGGTGGT GCATGGGCGG ACGAAAGAGC AGGGTTACCG CGCGGAGCAT
ATTGACTGGC AGGCGATTGG CGAGATTCGC CAGCGGCTGA ATATTCCGGT GATTGCCAAC
GGTGAAATCT GGAACTGGCA GAGTGCGCAA CAATGCATGA CGATCAGCGG ATGCGACGCA
GTGATGATTG GTCGCGGGGC GCTCAATATT CCCAACCTGA GCCGGGTGGT AAAATATAAC
GAACCGCGAA TGCCGTGGCC GGAGGTAGTT GCTTTGCTGC AAAAATATAC CCGTCTGGAA
AAGCAGGGCG ATACCGGGTT ATATCACGTA GCGCGGATTA AACAGTGGTT GAGTTATTTG
CGTAAAGAAT ACGATGAAGC AACAGAATTA TTTCAGCATG TTCGGATGTT GAATAATTCC
CCTGATATTG CAAGGGCTAT TCAGGCAATT GATATCGAGA AACTCTAA
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| Protein sequence | MRVLLAPMEG VLDSLVRELL TEVNDYDLCI TEFVRVVDQL LPVKVFHRIC PELQNASRTP
SGTLVRVQLL GQFPQWLAEN AARAVELGSW GVDLNCGCPS KTVNGSGGGA TLLKDPELIY
QGAKAMREAV PAHLPVSVKV RLGWDSGEKK FEIADAVQQA GATELVVHGR TKEQGYRAEH
IDWQAIGEIR QRLNIPVIAN GEIWNWQSAQ QCMTISGCDA VMIGRGALNI PNLSRVVKYN
EPRMPWPEVV ALLQKYTRLE KQGDTGLYHV ARIKQWLSYL RKEYDEATEL FQHVRMLNNS
PDIARAIQAI DIEKL
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