| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2286 |
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| Symbol | |
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| ID | 6143500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2314068 |
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| End bp | 2315093 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641617160 |
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| Product | IS110 family transposase |
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| Protein accession | YP_001744333 |
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| Protein GI | 170682362 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.438286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.00653664 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGTAT CAACTCTTGG TATCGACCTG GCAAAGAACG TTTTTCAGCT TCATGGTGTC
GATCATGAAG GCCATACTAT TTTGCGTAAA AAGCTCACCC GGGCTAAGTT TGTTCAGTTT
GTGATTCAAC TGGAACCTTG TCTGATTGGC ATGGAAGCCT GCTCATCCAG TCATTATTTT
GCGCGATTAT TCACCCGCTA TGGTCATGAG GTAAAACTCA TACCTCCGCA GTATGTGAAG
CCTTATGTGA AAACGAACAA GACGGATGCA ACAGATGCTG AAGCAATCTG CGAAGCGGTA
ACACGTCCGA ATATGCGTTT TGTTCAGATA AAAACCGAAG AGCAGCAGGC CGTTTTAGCG
TTACACACTG AACGGGGAAT ACTTATCCGT GAGCGGATTG CCTGTGCCAA TAGTTTAAGA
GCCACACTTG CTGAGTTTGG TATTACGATT GCGGCCGGAC AAAACCATTT AACCCGTGAG
CTGCCAGCCA TTCTGGAGGA TGGCGAAAAT GGTTTATCTC CCTTTGTCAG AACCAGCATC
TACAGACAGT CTAAACATAT CCGGGAACTT GAAGAACAAG TTAAACAGGT AGAAGAAGCT
CTGGCCTCCT GGTATAGAAC GCAGGAAGCC TGCCAGAGAA TGGCCAAGAT CCCGGGGGTT
GGCATGCTAA CGGCCACTTA TGTGGTAGCA GCAGTGGGTA ATGCCCGACA ATTCAGTACC
GCAAAGCAGT TCGCTTCATG GCTGGGGCTG ACACCAAAGG AACATTCCAG CGGCGGGAAA
CAGCAACTGG GAGGGATCAG CAAACGTGGA GATGGATATT TCCGATACCT GCTGGTTCAC
GGCGCACGCG CACTTACCGC CAGGGTCAAC CGAAACGGCG CGGTTGAGAA GAATTCCTGG
CTTCAGGGAC TCCTTGAGCG GAAGCACTAC AATGTAGCTG TTGTCGCCAT GGCGGCAAAA
ACAGCGAGGA TCATGTGGTC AATGTTGTCA CACAATACTG AATATCAACC TCGGCAGCTC
GCCTGA
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| Protein sequence | MKVSTLGIDL AKNVFQLHGV DHEGHTILRK KLTRAKFVQF VIQLEPCLIG MEACSSSHYF
ARLFTRYGHE VKLIPPQYVK PYVKTNKTDA TDAEAICEAV TRPNMRFVQI KTEEQQAVLA
LHTERGILIR ERIACANSLR ATLAEFGITI AAGQNHLTRE LPAILEDGEN GLSPFVRTSI
YRQSKHIREL EEQVKQVEEA LASWYRTQEA CQRMAKIPGV GMLTATYVVA AVGNARQFST
AKQFASWLGL TPKEHSSGGK QQLGGISKRG DGYFRYLLVH GARALTARVN RNGAVEKNSW
LQGLLERKHY NVAVVAMAAK TARIMWSMLS HNTEYQPRQL A
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