| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2285 |
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| Symbol | aqpZ |
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| ID | 6146647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2312859 |
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| End bp | 2313554 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641617159 |
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| Product | aquaporin Z |
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| Protein accession | YP_001744332 |
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| Protein GI | 170684199 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.134146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.00584782 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTCAGAA AATTAGCAGC TGAATGTTTT GGTACTTTCT GGCTTGTTTT TGGTGGCTGT
GGTAGTGCCG TACTGGCCGC AGGCTTCCCG GAATTAGGCA TTGGTTTTGC CGGCGTGGCG
CTTGCATTCG GTCTGACCGT TCTGACGATG GCCTTTGCTG TTGGTCATAT TTCTGGTGGT
CATTTTAACC CGGCGGTCAC TATTGGTTTA TGGGCTGGCG GACGTTTCCC GGCAAAAGAA
GTCGTTGGCT ACGTAATTGC CCAGGTTGTC GGCGGTATTG TTGCGGCGGC GCTGCTGTAT
TTAATTGCCA GTGGTAAAAC AGGTTTTGAC GCGGCAGCCA GCGGTTTTGC TTCTAACGGT
TATGGCGAGC ATTCGCCAGG CGGTTATTCC ATGCTTTCCG CGCTGGTAGT TGAACTGGTA
TTGAGTGCGG GCTTCCTGTT AGTGATCCAC GGCGCAACCG ACAAATTCGC TCCGGCAGGT
TTTGCGCCGA TAGCTATTGG TCTGGCCTTA ACCCTGATTC ACTTAATCAG TATTCCGGTG
ACTAACACTT CTGTTAACCC GGCGCGCAGC ACCGCGGTTG CTATCTTCCA GGGCGGCTGG
GCGTTAGAAC AACTGTGGTT CTTCTGGGTG GTGCCAATTG TCGGCGGTAT TATCGGTGGT
CTGATTTACC GGACCCTGCT GGAAAAGCGT AATTAA
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| Protein sequence | MFRKLAAECF GTFWLVFGGC GSAVLAAGFP ELGIGFAGVA LAFGLTVLTM AFAVGHISGG
HFNPAVTIGL WAGGRFPAKE VVGYVIAQVV GGIVAAALLY LIASGKTGFD AAASGFASNG
YGEHSPGGYS MLSALVVELV LSAGFLLVIH GATDKFAPAG FAPIAIGLAL TLIHLISIPV
TNTSVNPARS TAVAIFQGGW ALEQLWFFWV VPIVGGIIGG LIYRTLLEKR N
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