Gene EcSMS35_2284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2284 
Symbol 
ID6147268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2309786 
End bp2310778 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content50% 
IMG OID641617157 
Producthypothetical protein 
Protein accessionYP_001744330 
Protein GI170680310 
COG category[S] Function unknown 
COG ID[COG2990] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00241499 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00902859 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGAAAT CGACGTCATG TATAACCATT GATTTCATGA ATATGTCGCA GCTAACTGAA 
CGGACCTTTA CGCCATCTGA ATCTCTCAGC AGCCTGTCAC TTTTTCTTAG TCTGGCACGT
GGACAGTGTC GGCCGGGTAA ATTCTGGCAT CGCCGTAGTT TTCGCCAGAA ATTTTTGCTG
CGCTCGTTGA TTATGCCGCG TTTAAGCGTT GAGTGGATGA ACGAACTTTC CCACTGGCCT
AATCTCAATG TGTTGTTAAC GCGCCAGCCG CGACTGCCTG TGCGTCTGCA TCGCCCTTAC
CTTGCGGCGA ATCTTAGCCG TAAGCAATTG CTGGAGGCGT TACGTTACCA TTATGCGTTA
CTCCGCGGGT GTATGTCGGC GGAAGAATTC AGCTTATATT TGAATACCCC CGGGCTGCAA
CTGGCGAAGC TGGAAGGCAA AAACGGCGAG CAGTTCACAC TTGAGCTGAC CATGATGATC
TCAATGGATA AAGAAGGTGA CAGCACAATC CTGTTTCGCA ACAGCGAAGG TATTCCTCTG
GCAGAGATCA CGTTTACCCT GTGTGAATAT CAGGGGAAAA GAACAATGTT TATTGGCGGA
CTGCAAGGCG CAAAATGGGA AATCCCACAT CAGGAAATCC AGAATGCGAC GAAAGCCTGC
CACGGGCTAT TTCCCAAACG CCTCGTGATG GAAGCGGCCT GTCTGTTTGC CCAACGTTTG
CAGGTAGAGC AGATTATTGC CGTCAGCAAT GAAACGCATA TTTACCGCAG CCTGCGTTAT
CGCGATAAAG AAGGCAAGAT CCACGCTGAT TACAACGCTT TCTGGGAATC GGTTGGCGGC
GTATGTGATG CTGAACGCCA TTACCGCCTT CCAGCACAGA TAGCACGAAA AGAGATTGCC
GAAATCGCCA GTAAAAAACG GGCTGAATAC CGTCGGCGCT ATGAGATGCT CGACGCTATT
CAGCCACAAA TGGCCACGAT GTTTCGCGGT TAA
 
Protein sequence
MVKSTSCITI DFMNMSQLTE RTFTPSESLS SLSLFLSLAR GQCRPGKFWH RRSFRQKFLL 
RSLIMPRLSV EWMNELSHWP NLNVLLTRQP RLPVRLHRPY LAANLSRKQL LEALRYHYAL
LRGCMSAEEF SLYLNTPGLQ LAKLEGKNGE QFTLELTMMI SMDKEGDSTI LFRNSEGIPL
AEITFTLCEY QGKRTMFIGG LQGAKWEIPH QEIQNATKAC HGLFPKRLVM EAACLFAQRL
QVEQIIAVSN ETHIYRSLRY RDKEGKIHAD YNAFWESVGG VCDAERHYRL PAQIARKEIA
EIASKKRAEY RRRYEMLDAI QPQMATMFRG