Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2267 |
Symbol | rfbB |
ID | 6143755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2289443 |
End bp | 2290183 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641617142 |
Product | O-antigen export system ATP-binding protein RfbB |
Protein accession | YP_001744315 |
Protein GI | 170680867 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCAG TAATAAACTT TAGTCACGTT ACGAAAGAGT ATCCTCTTTA CCACCATATT GGCTCAGGAA TTAAGGATCT CGTATTTCAC CCTAAAAGAG CTTTTCAGCT GTTAAAAGGG CGTAAATATC TTGCGATCGA AGACATTACC TTCACCGTGG GTAAAGGCGA GGCCGTAGCG CTGATTGGTC GTAACGGCGC AGGGAAAAGT ACCTCCCTCG GGCTGGTGGC CGGCGTCATT AAGCCTACAA AAGGCACTGT TACAACCCAG GGACGCGTTG CCTCAATGCT TGAGCTAGGC GGCGGTTTTC ACCCTGAATT AACCGGGCGA GAAAATATTT ATCTCAATGC GACCCTGCTT GGGCTACGCC GCAAAGAGGT TCAGCAACGG ATGGATCGGA TAATTGAGTT CTCCGAGCTG GGTGATTTCA TTGACGAACC TATTCGCGTG TACTCAAGTG GTATGCTTGC GAAGCTTGGA TTCTCTGTCA TCAGCCAGGT AGAACCCGAT ATACTTATTA TCGATGAGGT ACTTGCTGTC GGTGACATTT CGTTCCAGGC CAAATGTATA CAAACAATAC GAGACTTCAA AAATAAGGGT GTAACGATAT TATTCGTTAG CCACAATATG AGTGATGTTG AAAAAATCTG TGACAGAGTT GTTTGGATCG AAAACCATAA ACTCCGCGAA ATTGGCTCAG CAGAGAGAAT CATTGAACTT TACAAGCAAG CAATGGCTTA A
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Protein sequence | MEPVINFSHV TKEYPLYHHI GSGIKDLVFH PKRAFQLLKG RKYLAIEDIT FTVGKGEAVA LIGRNGAGKS TSLGLVAGVI KPTKGTVTTQ GRVASMLELG GGFHPELTGR ENIYLNATLL GLRRKEVQQR MDRIIEFSEL GDFIDEPIRV YSSGMLAKLG FSVISQVEPD ILIIDEVLAV GDISFQAKCI QTIRDFKNKG VTILFVSHNM SDVEKICDRV VWIENHKLRE IGSAERIIEL YKQAMA
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