Gene EcSMS35_2267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2267 
SymbolrfbB 
ID6143755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2289443 
End bp2290183 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content45% 
IMG OID641617142 
ProductO-antigen export system ATP-binding protein RfbB 
Protein accessionYP_001744315 
Protein GI170680867 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCAG TAATAAACTT TAGTCACGTT ACGAAAGAGT ATCCTCTTTA CCACCATATT 
GGCTCAGGAA TTAAGGATCT CGTATTTCAC CCTAAAAGAG CTTTTCAGCT GTTAAAAGGG
CGTAAATATC TTGCGATCGA AGACATTACC TTCACCGTGG GTAAAGGCGA GGCCGTAGCG
CTGATTGGTC GTAACGGCGC AGGGAAAAGT ACCTCCCTCG GGCTGGTGGC CGGCGTCATT
AAGCCTACAA AAGGCACTGT TACAACCCAG GGACGCGTTG CCTCAATGCT TGAGCTAGGC
GGCGGTTTTC ACCCTGAATT AACCGGGCGA GAAAATATTT ATCTCAATGC GACCCTGCTT
GGGCTACGCC GCAAAGAGGT TCAGCAACGG ATGGATCGGA TAATTGAGTT CTCCGAGCTG
GGTGATTTCA TTGACGAACC TATTCGCGTG TACTCAAGTG GTATGCTTGC GAAGCTTGGA
TTCTCTGTCA TCAGCCAGGT AGAACCCGAT ATACTTATTA TCGATGAGGT ACTTGCTGTC
GGTGACATTT CGTTCCAGGC CAAATGTATA CAAACAATAC GAGACTTCAA AAATAAGGGT
GTAACGATAT TATTCGTTAG CCACAATATG AGTGATGTTG AAAAAATCTG TGACAGAGTT
GTTTGGATCG AAAACCATAA ACTCCGCGAA ATTGGCTCAG CAGAGAGAAT CATTGAACTT
TACAAGCAAG CAATGGCTTA A
 
Protein sequence
MEPVINFSHV TKEYPLYHHI GSGIKDLVFH PKRAFQLLKG RKYLAIEDIT FTVGKGEAVA 
LIGRNGAGKS TSLGLVAGVI KPTKGTVTTQ GRVASMLELG GGFHPELTGR ENIYLNATLL
GLRRKEVQQR MDRIIEFSEL GDFIDEPIRV YSSGMLAKLG FSVISQVEPD ILIIDEVLAV
GDISFQAKCI QTIRDFKNKG VTILFVSHNM SDVEKICDRV VWIENHKLRE IGSAERIIEL
YKQAMA