Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2259 |
Symbol | |
ID | 6143364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2280633 |
End bp | 2280959 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641617135 |
Product | IS629 transposase orfA |
Protein accession | YP_001744308 |
Protein GI | 170682322 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTAAAA ATACTCGTTT TTCCCCCGAA GTCCGTCAAC GGGCAGTTCG TATGGTTCTG GAAAGTCAGG GCGAATATGA CTCACAATGG GCGGCAATTT GTTCCATTGC TCCAAAGATT GGCTGTACGC CAGAGACTCT GCGCGTCTGG GTTCGCCAGC ATGAGCGGGA TACCGGGGGC GGTGATGGTG GGCTCACCAC CGCTGAACGT CAGCGTCTGA AAGAGCTGGA GCGTGAAAAT CGTGAACTGC GCCGCAGTAA CGATATCCTT CGCCAGGCTT CCGCTTATTT TGCGAAGGTG GAGTTCGACC GCCTCTGGAA AAAATGA
|
Protein sequence | MTKNTRFSPE VRQRAVRMVL ESQGEYDSQW AAICSIAPKI GCTPETLRVW VRQHERDTGG GDGGLTTAER QRLKELEREN RELRRSNDIL RQASAYFAKV EFDRLWKK
|
| |