Gene EcSMS35_2235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2235 
SymbolcudC 
ID6146794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2258150 
End bp2259871 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content54% 
IMG OID641617111 
Productcysteine/glutathione ABC transporter membrane/ATP-binding component 
Protein accessionYP_001744285 
Protein GI170682378 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components 
TIGRFAM ID[TIGR02868] thiol reductant ABC exporter, CydC subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.228638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCTT TGCTACCCTA TCTGGCACTG TATAAACGTC ATAAATGGAT GTTAAGTCTT 
GGTATTGTGC TGGCAATTGT CACGCTGCTC GCCAGCATCG GTCTGTTGAC ACTTTCGGGC
TGGTTCCTCT CCGCCTCAGC GGTTGCGGGG GTTGCCGGAC TGTACAGCTT CAACTATATG
CTACCCGCTG CGGGCGTGCG TGGCGCAGCA ATCACCCGTA CTGCCGGGCG CTATTTTGAA
CGCCTGGTAA GTCACGACGC GACTTTCCGC GTGTTGCAGC ATCTGCGCAT TTATACCTTC
AGCAAATTGC TGCCCCTCTC CCCTGCCGGA CTGGCGCGCT ATCGTCAGGG CGAATTGCTC
AACCGCGTGG TGGCGGATGT TGATACGCTC GATCATCTTT ACCTGCGCGT TATCTCGCCG
CTGGTGGGCG CTTTTGTGGT GATTATGGTG GTGACAATCG GGTTAAGTTT CCTTGATTTC
ACCCTCGCCT TTACGCTGGG CGGCATTATG TTACTGACGC TTTTCCTTAT GCCACCACTG
TTTTATCGTG CGGGAAAAAG CACCGGGCAA AATCTGACTC ATCTTCGCGG GCAGTATCGC
CAACAACTGA CGGCCTGGCT GCAAGGGCAA GCTGAGCTGA CCATTTTTGG TGCCAGCGAT
CGTTATCGCA CGCAGTTAGA GAATACCGAA ATTCAGTGGC TGGAATCGCA ACGTCGTCAA
TCTGAACTCA CCGCATTGTC GCAAGCGATA ATGCTGCTCA TTGGCGCGTT AGCGGTGATC
CTGATGCTGT GGATGGCGTC TGGCGGCGTT GGCGGCAATG CTCAACCCGG CGCGTTAATT
GCCCTGTTTG TCTTCTGCGC GTTAGCCGCG TTTGAAGCAC TGGCACCAGT AACGGGTGCA
TTTCAGCATC TGGGGCAAGT CATTGCCTCT GCCGTACGGA TCACTGACTT AACGGATCAA
AAACCGGAAG TCACCTTCCC TGATACCCAA ACTCGTGTTG CCGATCGTGT TTCGCTGACA
TTACGGGATG TTCAGTTCAC TTATCCAGAG CAATCCCAAC AGGCACTTAA AGGGATTTCT
CTTCAGGTAA ACGCCGGAGA ACATATAGCG ATTCTCGGGC GAACCGGATG CGGCAAATCA
ACATTGTTAC AACTGCTGAC CCGCGCATGG GACCCGCAAC AGGGCGAGAT TTTGCTTAAC
GATAGCCCCA TAGCCAGCCT GAATGAAGCG ACTCTACGAC AGACCATCAG CGTTGTGCCA
CAGCGAGTGC ATCTGTTTAG CGCCACGCTG CGTGATAATC TGTTACTCGC CTCGCCTGAT
AGTAGTGATG AGGCTCTGGC GGAGATCTTG CGTCGCGTTG GTCTGGAGAA GCTGCTCGAG
GATGCAGGTC TCAACAGTTG GTTGGGTGAA GGCGGACGCC AGCTCTCCGG TGGTGAACTG
CGCCGTCTGG CTATCGCCCG TGCGCTGTTA CATGATGCGC CACTGGTATT GCTGGATGAA
CCTACCGAAG GCTTAGATGC CACAACTGAA AGTCAGATCC TTGAATTACT TGCAGAAATG
ATGCGTGAGA AAACGGTGTT AATGGTCACC CATCGACTTC GCGGGCTCTC TCGTTTCCAG
CAAATAATAG TGATGGACAA CGGGCAAATT ATTGAGCAAG GTACTCACGC AGAACTGCTT
GCCCGACAGG GGCGTTATTA CCAGTTTAAG CAGGGTTTGT AA
 
Protein sequence
MRALLPYLAL YKRHKWMLSL GIVLAIVTLL ASIGLLTLSG WFLSASAVAG VAGLYSFNYM 
LPAAGVRGAA ITRTAGRYFE RLVSHDATFR VLQHLRIYTF SKLLPLSPAG LARYRQGELL
NRVVADVDTL DHLYLRVISP LVGAFVVIMV VTIGLSFLDF TLAFTLGGIM LLTLFLMPPL
FYRAGKSTGQ NLTHLRGQYR QQLTAWLQGQ AELTIFGASD RYRTQLENTE IQWLESQRRQ
SELTALSQAI MLLIGALAVI LMLWMASGGV GGNAQPGALI ALFVFCALAA FEALAPVTGA
FQHLGQVIAS AVRITDLTDQ KPEVTFPDTQ TRVADRVSLT LRDVQFTYPE QSQQALKGIS
LQVNAGEHIA ILGRTGCGKS TLLQLLTRAW DPQQGEILLN DSPIASLNEA TLRQTISVVP
QRVHLFSATL RDNLLLASPD SSDEALAEIL RRVGLEKLLE DAGLNSWLGE GGRQLSGGEL
RRLAIARALL HDAPLVLLDE PTEGLDATTE SQILELLAEM MREKTVLMVT HRLRGLSRFQ
QIIVMDNGQI IEQGTHAELL ARQGRYYQFK QGL