Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2235 |
Symbol | cudC |
ID | 6146794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2258150 |
End bp | 2259871 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641617111 |
Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
Protein accession | YP_001744285 |
Protein GI | 170682378 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.228638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCTT TGCTACCCTA TCTGGCACTG TATAAACGTC ATAAATGGAT GTTAAGTCTT GGTATTGTGC TGGCAATTGT CACGCTGCTC GCCAGCATCG GTCTGTTGAC ACTTTCGGGC TGGTTCCTCT CCGCCTCAGC GGTTGCGGGG GTTGCCGGAC TGTACAGCTT CAACTATATG CTACCCGCTG CGGGCGTGCG TGGCGCAGCA ATCACCCGTA CTGCCGGGCG CTATTTTGAA CGCCTGGTAA GTCACGACGC GACTTTCCGC GTGTTGCAGC ATCTGCGCAT TTATACCTTC AGCAAATTGC TGCCCCTCTC CCCTGCCGGA CTGGCGCGCT ATCGTCAGGG CGAATTGCTC AACCGCGTGG TGGCGGATGT TGATACGCTC GATCATCTTT ACCTGCGCGT TATCTCGCCG CTGGTGGGCG CTTTTGTGGT GATTATGGTG GTGACAATCG GGTTAAGTTT CCTTGATTTC ACCCTCGCCT TTACGCTGGG CGGCATTATG TTACTGACGC TTTTCCTTAT GCCACCACTG TTTTATCGTG CGGGAAAAAG CACCGGGCAA AATCTGACTC ATCTTCGCGG GCAGTATCGC CAACAACTGA CGGCCTGGCT GCAAGGGCAA GCTGAGCTGA CCATTTTTGG TGCCAGCGAT CGTTATCGCA CGCAGTTAGA GAATACCGAA ATTCAGTGGC TGGAATCGCA ACGTCGTCAA TCTGAACTCA CCGCATTGTC GCAAGCGATA ATGCTGCTCA TTGGCGCGTT AGCGGTGATC CTGATGCTGT GGATGGCGTC TGGCGGCGTT GGCGGCAATG CTCAACCCGG CGCGTTAATT GCCCTGTTTG TCTTCTGCGC GTTAGCCGCG TTTGAAGCAC TGGCACCAGT AACGGGTGCA TTTCAGCATC TGGGGCAAGT CATTGCCTCT GCCGTACGGA TCACTGACTT AACGGATCAA AAACCGGAAG TCACCTTCCC TGATACCCAA ACTCGTGTTG CCGATCGTGT TTCGCTGACA TTACGGGATG TTCAGTTCAC TTATCCAGAG CAATCCCAAC AGGCACTTAA AGGGATTTCT CTTCAGGTAA ACGCCGGAGA ACATATAGCG ATTCTCGGGC GAACCGGATG CGGCAAATCA ACATTGTTAC AACTGCTGAC CCGCGCATGG GACCCGCAAC AGGGCGAGAT TTTGCTTAAC GATAGCCCCA TAGCCAGCCT GAATGAAGCG ACTCTACGAC AGACCATCAG CGTTGTGCCA CAGCGAGTGC ATCTGTTTAG CGCCACGCTG CGTGATAATC TGTTACTCGC CTCGCCTGAT AGTAGTGATG AGGCTCTGGC GGAGATCTTG CGTCGCGTTG GTCTGGAGAA GCTGCTCGAG GATGCAGGTC TCAACAGTTG GTTGGGTGAA GGCGGACGCC AGCTCTCCGG TGGTGAACTG CGCCGTCTGG CTATCGCCCG TGCGCTGTTA CATGATGCGC CACTGGTATT GCTGGATGAA CCTACCGAAG GCTTAGATGC CACAACTGAA AGTCAGATCC TTGAATTACT TGCAGAAATG ATGCGTGAGA AAACGGTGTT AATGGTCACC CATCGACTTC GCGGGCTCTC TCGTTTCCAG CAAATAATAG TGATGGACAA CGGGCAAATT ATTGAGCAAG GTACTCACGC AGAACTGCTT GCCCGACAGG GGCGTTATTA CCAGTTTAAG CAGGGTTTGT AA
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Protein sequence | MRALLPYLAL YKRHKWMLSL GIVLAIVTLL ASIGLLTLSG WFLSASAVAG VAGLYSFNYM LPAAGVRGAA ITRTAGRYFE RLVSHDATFR VLQHLRIYTF SKLLPLSPAG LARYRQGELL NRVVADVDTL DHLYLRVISP LVGAFVVIMV VTIGLSFLDF TLAFTLGGIM LLTLFLMPPL FYRAGKSTGQ NLTHLRGQYR QQLTAWLQGQ AELTIFGASD RYRTQLENTE IQWLESQRRQ SELTALSQAI MLLIGALAVI LMLWMASGGV GGNAQPGALI ALFVFCALAA FEALAPVTGA FQHLGQVIAS AVRITDLTDQ KPEVTFPDTQ TRVADRVSLT LRDVQFTYPE QSQQALKGIS LQVNAGEHIA ILGRTGCGKS TLLQLLTRAW DPQQGEILLN DSPIASLNEA TLRQTISVVP QRVHLFSATL RDNLLLASPD SSDEALAEIL RRVGLEKLLE DAGLNSWLGE GGRQLSGGEL RRLAIARALL HDAPLVLLDE PTEGLDATTE SQILELLAEM MREKTVLMVT HRLRGLSRFQ QIIVMDNGQI IEQGTHAELL ARQGRYYQFK QGL
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