Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2215 |
Symbol | |
ID | 6142672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2231240 |
End bp | 2231932 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641617091 |
Product | hypothetical protein |
Protein accession | YP_001744265 |
Protein GI | 170682197 |
COG category | [S] Function unknown |
COG ID | [COG2323] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.297842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCGT TCGATCTCCA CCGTATGGCA TTTGATAAAG TGCCTTTTGA TTTCCTTGGC GAAGTGGCAC TACGTAGTCT TTATACCTTT GTACTGGTTT TTTTGTTCCT CAAAATGACC GGAAGACGCG GTGTGCGGCA GATGTCGCTT TTTGAAGTGT TAATCATTCT GACGCTGGGA TCAGCGGCGG GAGATGTGGC GTTTTATGAT GATGTGCCGA TGGTCCCGGT ACTTATCGTC TTTATCACTC TGGCGTTGTT ATACCGCCTG GTAATGTGGT TGATGGCGCA CAGTGAAAAA CTGGAAGATC TTCTGGAAGG CAAGCCGGTT GTCATTATTG AAGATGGCGA GCTGGCCTGG TCAAAACTCA ACAACTCCAA CATGACGGAA TTTGAGTTCT TTATGGAGCT ACGATTGCGC GGTGTGGAAC AGCTGGGGCA GGTACGTCTG GCGATTCTCG AAACCAACGG GCAAATCAGT GTTTATTTCT TTGAAGATGA CAAGGTGAAA CCGGGCTTAC TTATTTTACC CAGTGACTGT ACTCAGCGTT ACAAAGTGGT GCCGGAGTCG GCGGACTATG CCTGCATCCG TTGCAGTGAA ATCATTCATA TGAACGCGGG GGAAAAACAA TTATGTCCGC GCTGTGCAAA TCCAGAATGG ACGAAGGCAA GTCGGGCAAA ACGGGTGACG TGA
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Protein sequence | MKAFDLHRMA FDKVPFDFLG EVALRSLYTF VLVFLFLKMT GRRGVRQMSL FEVLIILTLG SAAGDVAFYD DVPMVPVLIV FITLALLYRL VMWLMAHSEK LEDLLEGKPV VIIEDGELAW SKLNNSNMTE FEFFMELRLR GVEQLGQVRL AILETNGQIS VYFFEDDKVK PGLLILPSDC TQRYKVVPES ADYACIRCSE IIHMNAGEKQ LCPRCANPEW TKASRAKRVT
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