| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2208 |
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| Symbol | ihfB |
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| ID | 6143068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2223143 |
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| End bp | 2223427 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641617084 |
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| Product | integration host factor subunit beta |
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| Protein accession | YP_001744258 |
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| Protein GI | 170683232 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000105854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.266842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAAGT CAGAATTGAT AGAAAGACTT GCCACCCAGC AATCGCACAT TCCCGCCAAG
ACGGTTGAAG ATGCAGTAAA AGAGATGCTG GAGCATATGG CCTCGACTCT TGCGCAGGGC
GAGCGTATTG AAATCCGCGG TTTCGGCAGT TTCTCTTTGC ACTACCGCGC ACCACGTACC
GGACGTAATC CGAAGACTGG CGATAAAGTA GAACTGGAAG GAAAATACGT TCCTCACTTT
AAACCAGGTA AAGAACTGCG CGATCGCGCC AATATTTACG GTTAA
|
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| Protein sequence | MTKSELIERL ATQQSHIPAK TVEDAVKEML EHMASTLAQG ERIEIRGFGS FSLHYRAPRT
GRNPKTGDKV ELEGKYVPHF KPGKELRDRA NIYG
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