Gene EcSMS35_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2201 
Symbol 
ID6142894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2213856 
End bp2214635 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content52% 
IMG OID641617076 
Producthypothetical protein 
Protein accessionYP_001744250 
Protein GI170681104 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000670511 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.151519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTTA CACTGAAAAA AGTGATTGGC AATATGTTGC TGCCACTTCC GCTGATGTTG 
TTGATTATTG GCGCTGGCCT GGCGCTGCTG TGGTTTAGCC GTTTTCAAAA AACCGGGAAG
ATTTTTATTA GCATTGGGTG GCTGGCGCTC TTGTTATTGA GTTTGCAACC GGTAGCCGAC
CGCCTGCTGC GTCCCATCGA AAGCACCTAT CCGACATGGA ATAATTCGCA AAAAGTGGAC
TATATCGTGG TGCTCGGAGG CGGTTATACC TGGAACCCAC AGTGGGCACC GAGTTCGAAT
TTAATCAATA ACAGTCTGCC ACGCCTGAAT GAAGGTATTC GCTTATGGCG CGAAAATCCG
GGATCAAAAC TGATCTTCAC GGGAGGCGTA GCAAAAACCA ATACGGTGAG TACAGCGGAA
GTAGGTGCCA GAGTTGCGCA ATCGCTGGGC GTACCGCGCG AGCAAATTAT CACCCTGGAT
TTGCCAAAAG ATACCGAAGA AGAAGCTGCG GCAGTGAAAC AGGCGATTGG TGACGCCCCT
TTCCTGCTGG TGACCTCCGC ATCACATCTG CCGCGGGCGA TGATCTTTTT TCAGCAGGAA
GGGTTAAATC CGCTACCAGC CCCGGCGAAT CAGTTGGCCA TCGACTCGCC GCTTAATCCG
TGGGAACGGG CAATCCCTTC TCCGGTTTGG TTGATGCATA GCGACCGCGT TGGCTATGAA
ACGCTTGGCC GGATCTGGCA ATGGCTGAAA GGTTCGTCAG GCGAGCCACG GCAAGAGTGA
 
Protein sequence
MLFTLKKVIG NMLLPLPLML LIIGAGLALL WFSRFQKTGK IFISIGWLAL LLLSLQPVAD 
RLLRPIESTY PTWNNSQKVD YIVVLGGGYT WNPQWAPSSN LINNSLPRLN EGIRLWRENP
GSKLIFTGGV AKTNTVSTAE VGARVAQSLG VPREQIITLD LPKDTEEEAA AVKQAIGDAP
FLLVTSASHL PRAMIFFQQE GLNPLPAPAN QLAIDSPLNP WERAIPSPVW LMHSDRVGYE
TLGRIWQWLK GSSGEPRQE