Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2198 |
Symbol | mukF |
ID | 6142992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2211616 |
End bp | 2212938 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641617074 |
Product | condesin subunit F |
Protein accession | YP_001744248 |
Protein GI | 170679667 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG3006] Uncharacterized protein involved in chromosome partitioning |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000709701 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0963487 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAT TTTCCCAGAC AGTCCCCGAA CTGGTTGCCT GGGCCAGAAA AAATGACTTC TCCATCTCGC TGCCGGTAGA CCGACTCTCT TTTCTGCTGG CGGTTGCCAC GCTGAACGGC GAGCGTCTGG ATGGTGAGAT GAGTGAAGGC GAGCTGGTGG ATGCATTCCG CCATGTGAGT GATGCGTTTG AGCAAACCAG CGAAACCATC GGCGTGCGTG CCAACAACGC GATCAACGAC ATGGTGCGTC AACGTCTGCT GAACCGCTTT ACCAGCGAGC AGGCGGAAGG GAACGCAATT TACCGTCTGA CGCCGCTCGG CATCGGCATT ACTGACTATT ACATCCGTCA GCGCGAGTTT TCTACGCTGC GCCTTTCTAT GCAGTTGTCG ATTGTGGCGG GTGAGCTCAA ACGCGCGGCA GATGCCGCCG AAGAGGGCGG TGATGAATTT CACTGGCACC GTAATGTTTA TGCGCCACTG AAATATTCGG TAGCAGAAAT TTTCGACAGT ATCGACCTGA CGCAACGTCT GATGGACGAA CAGCAGCAGC AGGTGAAGGA CGATATCGCC CAGTTGCTGA ACAAAGACTG GCGGGCGGCG ATCTCCAGCT GTGAATTGTT GCTTTCGGAA ACTTCCGGAA CGCTGCGTGA ATTGCAGGAT ACGCTGGAAG CGGCAGGCGA CAAATTGCAG GCTAATCTGT TGCGCATTCA GGATGCGACG ATGACCCATG ACGATCTGCA TTTTGTCGAT CGTCTGGTGT TCGATCTGCA GAGCAAACTT GACCGTATTA TCAGTTGGGG CCAGCAATCC ATCGACTTGT GGATTGGCTA CGACCGCCAC GTACACAAAT TTATCCGTAC CGCAATCGAT ATGGATAAAA ACCGCGTCTT TGCTCAGCGG TTACGTCAGT CGGTACAAAC CTATTTTGAT GAGCCGTGGG CGCTAACTTA TGCCAATGCC GATCGTCTGC TGGATATGCG TGACGAAGAG ATGGCACTGC GCGATGAAGA AGTGACTGGG GAACTTCCTG AGGATCTGGA GTACGAAGAG TTTAACGAGA TCCGCGAACA GCTGGCGGCG ATCATTGAAG AACAACTTGC CGTGTACAAA ACCAGACAAG TGCCGCTGGA TCTTGGTCTG GTGGTACGCG AATATCTGTC ACAGTATCCG CGTGCACGTC ACTTTGACGT TGCGCGCATT GTTATTGATC AGGCGGTACG TCTTGGCGTA GCGCAAGCAG ATTTCACCGG ACTGCCAGCG AAATGGCAGC CGATTAATGA TTACGGAGCC AAGGTACAGG CGCATGTCAT CGACAAATAT TGA
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Protein sequence | MSEFSQTVPE LVAWARKNDF SISLPVDRLS FLLAVATLNG ERLDGEMSEG ELVDAFRHVS DAFEQTSETI GVRANNAIND MVRQRLLNRF TSEQAEGNAI YRLTPLGIGI TDYYIRQREF STLRLSMQLS IVAGELKRAA DAAEEGGDEF HWHRNVYAPL KYSVAEIFDS IDLTQRLMDE QQQQVKDDIA QLLNKDWRAA ISSCELLLSE TSGTLRELQD TLEAAGDKLQ ANLLRIQDAT MTHDDLHFVD RLVFDLQSKL DRIISWGQQS IDLWIGYDRH VHKFIRTAID MDKNRVFAQR LRQSVQTYFD EPWALTYANA DRLLDMRDEE MALRDEEVTG ELPEDLEYEE FNEIREQLAA IIEEQLAVYK TRQVPLDLGL VVREYLSQYP RARHFDVARI VIDQAVRLGV AQADFTGLPA KWQPINDYGA KVQAHVIDKY
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