| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2190 |
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| Symbol | asnC |
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| ID | 6146514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2198460 |
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| End bp | 2199860 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617066 |
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| Product | asparaginyl-tRNA synthetase |
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| Protein accession | YP_001744240 |
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| Protein GI | 170682866 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0049494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.657641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGTTG TGCCTGTAGC CGACGTACTC CAGGGCCGCG TAGCCGTTGA CAGCGAAGTC
ACCGTGCGCG GATGGGTACG TACCCGCCGA GATTCAAAAG CTGGCATCTC CTTCCTCGCC
GTTTATGACG GTTCCTGCTT TGATCCTGTA CAGGCTGTCA TCAATAATTC TCTGCCCAAC
TACAATGAAG ACGTCCTGCG TCTGACCACC GGCTGCTCGG TCATTGTGAC GGGTAAAGTC
GTGGCGTCGC CGGGCCAGGG GCAACAATTT GAAATTCAGG CCAGCAAGGT TGAAGTTGCT
GGTTGGGTTG AAGATCCAGA CACTTACCCG ATGGCGGCAA AACGCCACAG CATTGAGTAT
CTGCGTGAAG TCGCTCACCT GCGTCCGCGC ACAAACCTGA TTGGTGCCGT CGCGCGCGTT
CGCCATACGC TGGCGCAGGC GCTGCATCGC TTCTTTAACG AGCAGGGATT CTTCTGGGTT
TCAACGCCAC TGATTACTGC GTCTGATACC GAAGGGGCTG GCGAAATGTT CCGCGTTTCT
ACGCTGGATC TGGAAAACCT GCCGCGTAAC GATCAGGGCA AAGTGGATTT CGACAAAGAC
TTCTTTGGTA AAGAGTCTTT CCTGACCGTA TCTGGCCAGT TGAACGGCGA AACCTACGCT
TGCGCATTAT CCAAAATTTA TACCTTCGGC CCGACTTTCC GTGCTGAAAA CTCCAACACC
AGCCGTCACC TGGCGGAATT CTGGATGCTG GAGCCGGAAG TGGCGTTTGC TAACCTGAAC
GATATCGCGG GTCTGGCTGA AGCCATGCTG AAATATGTCT TCAAAGCGGT TCTCGAAGAA
CGCGCTGACG ACATGAAATT CTTCGCTGAA CGCGTAGATA AAGATGCCGT TTCACGTCTG
GAACGCTTCA TTGAAGCCGA TTTTGCGCAG GTGGATTACA CCGACGCAGT GACCATTCTC
GAAAACTGCG GCAGGAAGTT TGAAAACCCG GTTTACTGGG GCGTTGATCT CTCTTCTGAG
CATGAGCGTT ATCTGGCGGA AGAACACTTT AAAGCACCGG TAGTGGTTAA AAACTATCCG
AAAGATATTA AAGCGTTCTA TATGCGCCTT AACGAAGACG GTAAAACCGT TGCGGCTATG
GACGTTCTGG CTCCGGGCAT CGGTGAGATC ATTGGTGGCT CCCAGCGTGA AGAACGTCTG
GACGTGCTGG ACGAGCGTAT GCTGGAAATG GGCCTGAATA AAGAAGATTA CTGGTGGTAT
CGCGATCTGC GTCGCTACGG TACTGTTCCG CATTCAGGTT TCGGTCTTGG TTTTGAACGC
CTGATTGCTT ACGTAACTGG TGTGCAAAAC GTGCGTGATG TGATTCCGTT CCCACGTACT
CCGCGTAACG CCAGCTTCTA A
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| Protein sequence | MSVVPVADVL QGRVAVDSEV TVRGWVRTRR DSKAGISFLA VYDGSCFDPV QAVINNSLPN
YNEDVLRLTT GCSVIVTGKV VASPGQGQQF EIQASKVEVA GWVEDPDTYP MAAKRHSIEY
LREVAHLRPR TNLIGAVARV RHTLAQALHR FFNEQGFFWV STPLITASDT EGAGEMFRVS
TLDLENLPRN DQGKVDFDKD FFGKESFLTV SGQLNGETYA CALSKIYTFG PTFRAENSNT
SRHLAEFWML EPEVAFANLN DIAGLAEAML KYVFKAVLEE RADDMKFFAE RVDKDAVSRL
ERFIEADFAQ VDYTDAVTIL ENCGRKFENP VYWGVDLSSE HERYLAEEHF KAPVVVKNYP
KDIKAFYMRL NEDGKTVAAM DVLAPGIGEI IGGSQREERL DVLDERMLEM GLNKEDYWWY
RDLRRYGTVP HSGFGLGFER LIAYVTGVQN VRDVIPFPRT PRNASF
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