| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2183 |
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| Symbol | |
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| ID | 6144480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2190501 |
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| End bp | 2191460 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617059 |
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| Product | alkanesulfonate transporter substrate-binding subunit |
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| Protein accession | YP_001744233 |
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| Protein GI | 170683457 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.680381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAGC TCATTAAACT GGTGCTGGCG GGTTTACTTA GCGTCTCTAC ACTTGCTGTT
GCCGCGGAGT CTTCGCCAGA GGCGTTACGA ATTGGCTATC AGAAAGGCAG TATTGGTATG
GTGCTGGCAA AAAGCCACCA ATTACTGGAA AAACGCTATC CGCAAACAAA AATCTCCTGG
GTGGAGTTCC CGGCTGGCCC ACAGATGCTG GAGGCGTTAA ACGTTGGCAG TATTGATCTC
GGCAGTACCG GGGATATTCC GCCAATCTTT GCCCAGGCTG CCGGGGCTGA TTTGGTGTAC
GTGGGCGTCG AGCCGCCGAA GCCCAAAGCC GAAGTGATTC TGGTGGCAGA TAACAGCCCA
ATCAAAACCG TAGCCGATCT TAAAGGTCAT AAAGTTGCCT TTCAGAAAGG TTCCAGCTCG
CACAATCTTT TACTACGCGC ACTACGCCAG GCCGGGCTTA AATTCACGGA TATCCAGCCC
ACTTACCTGA CGCCTGCCGA TGCCCGCGCC GCGTTCCAGC AAGGTAACGT TGACGCCTGG
GCTATCTGGG ATCCCTACTA CTCCGCTGCA TTATTACAGG GCGGCGTGCG GGTGTTGAAA
GACGGCACCG ATCTCAATCA AACCGGATCG TTTTATCTGG CAGCCCGTCC GTATGCAGAA
AAAAACGGCG CTTTTATTCA GGGCGTACTG GCAACCTTTA GTGAGGCCGA TGCGTTAACC
CGCAGCCAGC GCGAACAAAG CATCGCTTTA CTGGCAAAAA CGATGGGCTT ACCGGCACCG
GTTATTGCCT CGTATCTGGA TCATCGTCCT CCCACCACCA TCAAACCGTT GAGCGCTGAA
GTTGCCGCCT TACAGCAGCA AACGGCAGAT CTGTTTTATG AAAACCGTCT GGTGCCGAAA
AAAGTCGATA TTCGCCAGCG CATCTGGCAA CCCACTCAAC TGGAAGGAAA ACAATTATGA
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| Protein sequence | MRKLIKLVLA GLLSVSTLAV AAESSPEALR IGYQKGSIGM VLAKSHQLLE KRYPQTKISW
VEFPAGPQML EALNVGSIDL GSTGDIPPIF AQAAGADLVY VGVEPPKPKA EVILVADNSP
IKTVADLKGH KVAFQKGSSS HNLLLRALRQ AGLKFTDIQP TYLTPADARA AFQQGNVDAW
AIWDPYYSAA LLQGGVRVLK DGTDLNQTGS FYLAARPYAE KNGAFIQGVL ATFSEADALT
RSQREQSIAL LAKTMGLPAP VIASYLDHRP PTTIKPLSAE VAALQQQTAD LFYENRLVPK
KVDIRQRIWQ PTQLEGKQL
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