| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2180 |
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| Symbol | |
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| ID | 6146314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2188257 |
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| End bp | 2188931 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641617056 |
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| Product | periplasmic pilus chaperone family protein |
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| Protein accession | YP_001744230 |
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| Protein GI | 170682796 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.774785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGTAA GTTTAACGGC AATATTACTC AGCTGTTCGT TCACATGGGC GGCAGGTAAA
GGTGGGGTCG GACTTGCAGC AACACGTCTT GTTTATTCGG AAGGTGAAGA GCAAATTTCA
CTGGGTGTAC GTAACACCAG TCCGGATGTT CCTTATCTGA TTCAGTCATG GGTGATGACA
CCAGATAATA AAAAGTCAGC GGACTTTATT ATTACACCAC CGCTATTTGT GCTGAATCCG
GCAAACGAGA ACCTGCTACG CATTATGTAC ATTGGCGCGC CGTTGGCGAA AGACAGAGAA
ACTCTTTTCT TCACCAGCGT ACGGGCAGTC CCTTCAACAA CGAAGCGGGA AGAAGGCAAT
ACCCTGAAGA TTGCCACACA AAGCGTCATC AAACTTTTCT GGCGACCAAA AGGTTTAGCG
TATCCCTTAG CCGAGGCTCC GGCGAAACTA CGTTGCACTT CGTCAGCTGA CATGGTTACG
GTCAGTAACC CAACACCTTA TTTCATTACC CTGACAGACC TGAAAATAGG TGGAAAAGTA
GTTAAAAATC AAATGATTTC CCCCTTTGAT AAATACCAAT TCTCTCTGCC AATGGGTGCC
AAAAACAGCA GCGTAACGTA CCGAACTATC AATGACTACG GGGCGGAAAC GCCGCAACTC
AACTGTAAAT CGTAA
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| Protein sequence | MTVSLTAILL SCSFTWAAGK GGVGLAATRL VYSEGEEQIS LGVRNTSPDV PYLIQSWVMT
PDNKKSADFI ITPPLFVLNP ANENLLRIMY IGAPLAKDRE TLFFTSVRAV PSTTKREEGN
TLKIATQSVI KLFWRPKGLA YPLAEAPAKL RCTSSADMVT VSNPTPYFIT LTDLKIGGKV
VKNQMISPFD KYQFSLPMGA KNSSVTYRTI NDYGAETPQL NCKS
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