| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2177 |
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| Symbol | |
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| ID | 6146479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2184017 |
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| End bp | 2184469 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641617053 |
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| Product | fimbrial protein |
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| Protein accession | YP_001744227 |
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| Protein GI | 170683162 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000769116 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATTT ATGGTAATGT GGTCGATCAG GGCTGTGATG TTGCCACCAA AAGTGCATTA
CAAAATATTC ATATTGGTGA TTTTAATATC AGTGATTTTC AGACCGCGAA TACCGTAAGC
ACTGCTGCTG ATTTGAATAT CGATATCACC GGTTGTGCCG CTGGTATTAC TGGCGCGGAC
GTCCTTTTTA GCGGCGAGGC TGACACCCTT GTGCCGACAC TGCTCAAATT AACTGACACA
GGCGGAAGCG GTGGTATGGC AACGGGGATT GCTGTGCAAA TTCTTGATGC GCAAAGTCAG
CAAGAAATCC CGCTCAATCA GGTCCTACCT CTTACGCCCT TAAAAGCCGG GGATAACACA
CTCAAATATC AACTTCGTTA TAAGTCCACA AAGGCGGGAG CAACGGGCGG TAATGCGACG
GCGGTTCTCT ATTTTGATCT GGTTTACCAG TGA
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| Protein sequence | MHIYGNVVDQ GCDVATKSAL QNIHIGDFNI SDFQTANTVS TAADLNIDIT GCAAGITGAD
VLFSGEADTL VPTLLKLTDT GGSGGMATGI AVQILDAQSQ QEIPLNQVLP LTPLKAGDNT
LKYQLRYKST KAGATGGNAT AVLYFDLVYQ
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