| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2176 |
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| Symbol | |
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| ID | 6146076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2183494 |
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| End bp | 2184006 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641617052 |
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| Product | fimbrial protein |
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| Protein accession | YP_001744226 |
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| Protein GI | 170682280 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00102099 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACAGA TAATCTGGAT TCTGTTCTTA CTGGGATTAA CGGGGGGCTG TGAGCTATTT
GCCCATGATG GCACGGTCAA CATTAGCGGA TCGTTTCGCC GTAATACATG CGTGCTGGCA
CAGGATAGCA AGCAAATCAA TGTGCAGTTA GGCGACGTCT CGCTGACACG TTTTTCTCAT
GGGAATTATG GCCCGGAGAA ATCGTTCATC ATTAATTTGC AGGATTGCGG AACAGATGTC
AGCACGGTTG ACGTCACCTT TTCAGGAACC CCCGACGGAG TACAGAGCGA AATGCTGTCC
ATTGAAAGTG GTACGGATGC AGCCAGTGGG CTGGCAATTG CAATTCTGGA TGATGCGAAG
ATATTGATTC CGCTTAACCA GGCGAGTAAA GACTACAGCC TACATAGCGG TAAGGTGCCA
TTAACTTTTT ACGCGCAATT GCGACCTGTC AATAGCGATG TGCAGTCGGG TAAAGTGAAT
GCCAGCGCGA CATTTGTACT TCATTATGAC TAA
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| Protein sequence | MKQIIWILFL LGLTGGCELF AHDGTVNISG SFRRNTCVLA QDSKQINVQL GDVSLTRFSH
GNYGPEKSFI INLQDCGTDV STVDVTFSGT PDGVQSEMLS IESGTDAASG LAIAILDDAK
ILIPLNQASK DYSLHSGKVP LTFYAQLRPV NSDVQSGKVN ASATFVLHYD
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