| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2174 |
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| Symbol | pyrD |
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| ID | 6143184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2181670 |
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| End bp | 2182680 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641617050 |
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| Product | dihydroorotate dehydrogenase 2 |
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| Protein accession | YP_001744224 |
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| Protein GI | 170682541 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000792039 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.661729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACTACC CCTTCGTTCG TAAAGCCCTT TTCCAGCTCG ATCCAGAGCG CGCTCATGAG
TTTACTTTTC AGCAATTACG CCGTATTACC GGAACGCCGT TTGAAGCACT GGTGCGGCAG
AAAGTGCCTG CGAAACCTGT TAACTGCATG GGCCTGACGT TTAAAAATCC GCTTGGTCTG
GCAGCCGGTC TTGATAAAGA CGGGGAGTGC ATTGACGCGT TAGGCGCGAT GGGTTTTGGA
TCTATCGAGA TCGGTACCGT CACGCCACGT CCACAGCCAG GTAATGACAA GCCGCGTCTC
TTTCGTCTGG TAGATGCCGA AGGTTTGATC AACCGTATGG GCTTTAATAA TCTTGGCGTT
GATAACCTCG TAGAGAACGT AAAAAAAGCC CATTATGATG GCGTCCTGGG TATTAACATC
GGCAAAAATA AAGATACGCC GGTGGAGCAG GGTAAAGATG ACTATCTGAT TTGTATGGAA
AAAATCTATG CTTATGCGGG ATATATCGCC ATCAATATTT CATCGCCGAA TACCCCAGGA
CTACGCACAC TGCAATATGG CGAAGCGCTG GATGATCTCT TAACCGCGAT TAAAAATAAG
CAAAATGATT TGCAAGCGAT GCACCATAAA TATGTGCCGA TCGCAGTGAA GATCGCGCCG
GATCTTTCTG AAGAAGAATT GATCCAGGTT GCCGATAGTT TAGTTCGCCA TAATATTGAT
GGCGTTATTG CAACCAATAC CACGCTCGAT CGTTCTCTGG TTCAGGGAAT GAAAAATTGT
GATCAAACCG GTGGCTTAAG TGGTCGTCCG CTTCAGTTAA AAAGCACAGA AATTATTCGC
CGCTTGTCAC AGGAATTAAA CGGTCGCTTA CCGATCATCG GTGTTGGCGG CATTGACTCG
GTTATCGCTG CGCGTGAAAA GATTGCTGCG GGGGCCTCAC TGGTGCAAAT TTATTCTGGT
TTTATTTTTA AAGGTCCGCC GCTGATTAAA GAAATCGTTA CCCATATCTA A
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| Protein sequence | MYYPFVRKAL FQLDPERAHE FTFQQLRRIT GTPFEALVRQ KVPAKPVNCM GLTFKNPLGL
AAGLDKDGEC IDALGAMGFG SIEIGTVTPR PQPGNDKPRL FRLVDAEGLI NRMGFNNLGV
DNLVENVKKA HYDGVLGINI GKNKDTPVEQ GKDDYLICME KIYAYAGYIA INISSPNTPG
LRTLQYGEAL DDLLTAIKNK QNDLQAMHHK YVPIAVKIAP DLSEEELIQV ADSLVRHNID
GVIATNTTLD RSLVQGMKNC DQTGGLSGRP LQLKSTEIIR RLSQELNGRL PIIGVGGIDS
VIAAREKIAA GASLVQIYSG FIFKGPPLIK EIVTHI
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