Gene EcSMS35_2167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2167 
Symbol 
ID6145752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2172135 
End bp2172698 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content52% 
IMG OID641617043 
Productputative lipoprotein 
Protein accessionYP_001744217 
Protein GI170682434 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000482452 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.394753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT GGCTAGTGAC GATTGCAGCA CTGTGGCTGG CCGGATGCAG CTCCGGCGAA 
ATTAATAAAA ACTATTACCA GTTACCTGTG GTGCAGGGCG GTACACAAAG TACCGCCAGC
CAGGGTAATC GCCTGTTATG GGTAGAGCAG GTCGCTGTTC CTGACTATCT GGCGGGAAAT
GGTGTGGTTT ATCAAACCAG TGATGTGAAG TATGTGATTG CCAACAACAA CTTGTGGGCC
AGCCCGTTGG ATCAACAGTT GCGCAACACT CTGGTTGCCA ACCTGAGCAC GCAACTGCCC
GGCTGGGTGG TTGCCTCCCA GCCTCTGGGA AGCGCCCAGG ATACGCTCAA TGTTACCGTA
ACGGAGTTTA ACGGGCGATA TGATGGCAAG GTCATTGTCA GTGGTGAATG GCTGTTGAAC
CACCAGGGAC AACTGATCAA ACGTCCGTTC CGTCTGGAAG GGGTGCAAAC TCAGGATGGT
TACGATGAGA TGGTTAAAGT ACTGGCCAGT GTCTGGAGTC AGGAAGCCGC TTCTATTGCG
CAAGAGATAA AGCGTCTACC TTAA
 
Protein sequence
MKKWLVTIAA LWLAGCSSGE INKNYYQLPV VQGGTQSTAS QGNRLLWVEQ VAVPDYLAGN 
GVVYQTSDVK YVIANNNLWA SPLDQQLRNT LVANLSTQLP GWVVASQPLG SAQDTLNVTV
TEFNGRYDGK VIVSGEWLLN HQGQLIKRPF RLEGVQTQDG YDEMVKVLAS VWSQEAASIA
QEIKRLP