| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2163 |
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| Symbol | ompA |
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| ID | 6146246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2167505 |
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| End bp | 2168581 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617039 |
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| Product | outer membrane protein A |
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| Protein accession | YP_001744213 |
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| Protein GI | 170681860 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000195857 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.269234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGATGATA ACGAGGCGCA AAAAATGAAA AAGACAGCTA TCGCGATTGC AGTGGCACTG
GCTGGTTTCG CTACCGTAGC GCAGGCCGCT CCGAAAGATA ACACCTGGTA CACTGGTGCT
AAACTGGGCT GGTCCCAGTA CCATGACACT GGTTTTATTC CTAACAATGG TCCGACCCAC
GAAAACCAAC TGGGTGCAGG TGCTTTTGGT GGTTACCAGG TTAACCCGTA TGTTGGCTTT
GAAATGGGTT ACGACTGGTT AGGTCGTATG CCGTACAAAG GCGACAACAT CAACGGCGCA
TACAAAGCTC AGGGCGTTCA GCTGACCGCT AAACTGGGTT ACCCAATCAC TGACGATCTG
GACGTTTACA CTCGTCTGGG TGGTATGGTA TGGCGTGCAG ACACCAAGTC TAACGTACCT
GGTGGCGCAT CCACTAAAGA CCACGACACC GGCGTTTCTC CGGTCTTCGC TGGCGGTGTT
GAGTACGCGA TCACTCCTGA AATCGCTACC CGTCTGGAAT ACCAGTGGAC CAACAACATC
GGTGACGCAC ACACCATCGG TACTCGTCCG GACAACGGCA TGCTGAGCCT GGGTGTTTCC
TACCGTTTCG GTCAGGGCGA AGCAGCTCCA GTAGTTGCTC CGGCTCCAGC TCCGGCACCG
GAAGTACAGA CCAAGCACTT CACTCTGAAG TCTGACGTTC TGTTCAACTT CAACAAAGCA
ACCCTGAAAC CGGAAGGTCA GGCTGCTCTG GATCAGCTGT ACAGCCAGCT GAGCAACCTG
GATCCGAAAG ACGGTTCCGT AGTTGTTCTG GGTTACACCG ACCGCATCGG TTCTGACGCT
TACAACCAGG CTCTGTCCGA GCGTCGTGCT CAGTCTGTTG TTGATTACCT GATCTCTAAA
GGTATCCCGG CAGACAAAAT CTCCGCACGT GGTATGGGCG AATCCAACCC GGTTACTGGC
AACACCTGTG ACAACGTGAA ACAGCGTGCT GCACTGATCG ACTGCCTGGC TCCGGATCGT
CGCGTAGAGA TCGAAGTTAA AGGTATCAAA GACGTTGTAA CTCAGCCGCA GGCTTAA
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| Protein sequence | MDDNEAQKMK KTAIAIAVAL AGFATVAQAA PKDNTWYTGA KLGWSQYHDT GFIPNNGPTH
ENQLGAGAFG GYQVNPYVGF EMGYDWLGRM PYKGDNINGA YKAQGVQLTA KLGYPITDDL
DVYTRLGGMV WRADTKSNVP GGASTKDHDT GVSPVFAGGV EYAITPEIAT RLEYQWTNNI
GDAHTIGTRP DNGMLSLGVS YRFGQGEAAP VVAPAPAPAP EVQTKHFTLK SDVLFNFNKA
TLKPEGQAAL DQLYSQLSNL DPKDGSVVVL GYTDRIGSDA YNQALSERRA QSVVDYLISK
GIPADKISAR GMGESNPVTG NTCDNVKQRA ALIDCLAPDR RVEIEVKGIK DVVTQPQA
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