| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2160 |
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| Symbol | |
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| ID | 6145516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2163691 |
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| End bp | 2165853 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641617035 |
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| Product | hypothetical protein |
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| Protein accession | YP_001744209 |
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| Protein GI | 170679898 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1289] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01666] hypothetical membrane protein, TIGR01666
[TIGR01667] integral membrane protein, YccS/YhfK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00328985 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.533884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTTA TGCTAAGTCC TTTGCTCAAA CGCTATACCT GGAACAGCGC CTGGCTGTAT
TACGCGCGTA TTTTTATTGC GCTTTGTGGA ACCACAGCGT TTCCGTGGTG GCTGGGTGAT
GTAAAACTGA CGATTCCGCT GACGCTGGGG ATGGTGGCAG CGGCGCTGAC CGATCTCGAT
GACCGACTGG CGGGACGTTT GCGTAACCTC ATCATTACGC TGTTCTGCTT TTTTATCGCC
TCGGCCTCAG TAGAACTGCT GTTTCCCTGG CCCTGGCTAT TTGCGATTGG CTTAACGCTC
TCAACCAGCG GCTTCATTTT GCTCGGCGGT CTGGGTCAAC GCTATGCAAC AATTGCCTTC
GGTGCGTTAC TGATCGCCAT TTACACTATG TTGGGGACGT CACTGTATGA GCACTGGTAT
CAGCAGCCGA TGTATCTGCT GGCCGGTGCC GTCTGGTACA ACGTCCTGAC ACTTATTGGT
CATCTACTGT TCCCGGTCCG CCCGCTGCAG GACAACCTGG CGCGTTGCTA TGAACAACTG
GCGCGTTATC TTGAGCTCAA GTCGCGCATG TTTGATCCTG ATATTGAAGA TGAAAGCCAG
GCACCGCTGT ACGATTTGGC TCTCGCCAAC GGTCAGCTGA TGGCGACATT GAATCAGACG
AAACTCTCGC TGCTGACCCG CTTACGTGGC GATCGTGGTC AACGGGGAAC GCGTCGCACA
CTGCATTATT ACTTTGTCGC GCAGGATATT CACGAGCGTG CCAGCTCTTC TCATATTCAG
TATCAAACAT TGCGTGAACA TTTTCGCCAC AGCGACGTGC TGTTCCGTTT TCAGCGGCTG
ATGTCGATGC AGGGCCAGGC GTGCCAGCAA CTGTCACGCT GTATTTTGCT GCGTCAGCCT
TATCAACATG ATCCGCATTT TGAGCGCGCT TTTACGCATA TTGATGCTGC GCTGGAGCGG
ATGCGCGATA ACGGCGCGCC TGCTGATTTA CTCAAAACAC TGGGATTTTT ACTGAACAAT
TTACGTGCCA TTGATGCCCA ACTGGCAACA ATTGAATCAG AACAGGCCCA GGCACTGCCC
CATAATGATG ACGAAAATGA GCTCGCTGAT GACAGCCCGC ACGGATTGAG TGATATCTGG
CTGCGTCTTA GCCGTCACTT CACGCCGGAA TCCGCCCTCT TCCGTCATGC GGTAAGAATG
TCGCTGGTGT TGTGCTTCGG CTACGCCATC ATTCAGATAA CCGGACTGCA TCACGGGTAT
TGGATCTTGC TGACAAGTTT GTTTGTCTGC CAGCCAAACT ATAACGCCAC GCGCCACCGC
CTGAAATTAA GGATTATTGG TACGCTGGTA GGTATCGCGA TTGGCATTCC TGTGCTGTGG
TTTGTGCCGT CACTGGAAGG GCAGCTGGTG CTGCTGGTTA TTACCGGCGT GCTCTTTTTT
GCCTTCCGTA ACGTGCAATA TGCCCATGCA ACGATGTTCA TCACACTTTT GGTGCTACTT
TGTTTTAACT TGCTGGGTGA AGGTTTTGAA GTGGCGTTAC CTCGCGTAAT CGATACGCTG
ATTGGTTGTG CCATTGCGTG GGCGGCGGTG AGCTACATCT GGCCTGACTG GAAGTTTCGC
AATCTGCCGC GCATGCTCGA ACGTGCCACC GAGGCCAACT GTCGCTATCT CGATGCCATA
CTGGAGCAAT ACCATCAGGG GCGTGATAAC CGTCTGGCGT ATCGTATTGC CCGCCGCGAT
GCACACAACC GTGATGCTGA ACTGGCGTCG GTGGTATCAA ATATGTCCAG CGAGCCGAAC
GTTACCCCGC AAATTCGCGA GGCCGCGTTT CGGTTGCTGT GCCTTAACCA TACGTTTACC
AGCTATATCT CAGCCCTCGG TGCTCACCGG GAGCAGTTAA CTAATCCTGA AATTCTGGCG
TTTCTTGATG ACGCAGTTTG CTATGTTGAT GACGCGTTAC ATCATCAACC TGCTGATGAA
GAACGCGTCA ATCAGGCATT AGCTGGCCTG AAACAGCGGA TGCAGCAACT TGAACCACGG
GCAGACAGCA AAGAACCTCT GGTCGTACAA CAAGTTGGGT TATTGATTGC ATTACTGCCA
GAGATTGGTC GTCTGCAACG CCAGATTACT CAAGTTCCGC AGGAAACTCC TGTTTCGGCG
TAA
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| Protein sequence | MAFMLSPLLK RYTWNSAWLY YARIFIALCG TTAFPWWLGD VKLTIPLTLG MVAAALTDLD
DRLAGRLRNL IITLFCFFIA SASVELLFPW PWLFAIGLTL STSGFILLGG LGQRYATIAF
GALLIAIYTM LGTSLYEHWY QQPMYLLAGA VWYNVLTLIG HLLFPVRPLQ DNLARCYEQL
ARYLELKSRM FDPDIEDESQ APLYDLALAN GQLMATLNQT KLSLLTRLRG DRGQRGTRRT
LHYYFVAQDI HERASSSHIQ YQTLREHFRH SDVLFRFQRL MSMQGQACQQ LSRCILLRQP
YQHDPHFERA FTHIDAALER MRDNGAPADL LKTLGFLLNN LRAIDAQLAT IESEQAQALP
HNDDENELAD DSPHGLSDIW LRLSRHFTPE SALFRHAVRM SLVLCFGYAI IQITGLHHGY
WILLTSLFVC QPNYNATRHR LKLRIIGTLV GIAIGIPVLW FVPSLEGQLV LLVITGVLFF
AFRNVQYAHA TMFITLLVLL CFNLLGEGFE VALPRVIDTL IGCAIAWAAV SYIWPDWKFR
NLPRMLERAT EANCRYLDAI LEQYHQGRDN RLAYRIARRD AHNRDAELAS VVSNMSSEPN
VTPQIREAAF RLLCLNHTFT SYISALGAHR EQLTNPEILA FLDDAVCYVD DALHHQPADE
ERVNQALAGL KQRMQQLEPR ADSKEPLVVQ QVGLLIALLP EIGRLQRQIT QVPQETPVSA
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