Gene EcSMS35_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2155 
Symbol 
ID6144929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2159809 
End bp2160471 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content50% 
IMG OID641617031 
Producthypothetical protein 
Protein accessionYP_001744205 
Protein GI170683084 
COG category[S] Function unknown 
COG ID[COG3110] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.257613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.348745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG GCATCGTGAC CACCTTGATT GCATTATGTT TGCCGGTATC CGTTTTTGCC 
ACCACGCTGC GGCTTTCAAC CGATGTCGAT CTTCTGGTAC TCGACGGTAA AAAGGTTTCC
AGCTCTCTGC TGCGCGGTGC GGACAGCATT GAACTGGATA ACGGACCGCA TCAGTTAGTG
TTTCGCGTTG AGAAGACGAT TCATCTTTCC AATAGTGAAG AACGGCTGTA TATCTCCCCA
CCGCTGGTGG TCAGTTTTAA TACCCAGCTC ATCAACCAGG TCAATTTTCG CCTGCCTCGT
CTGGAGAATG AGCGGGAAGC TAACCATTTT GATGCCGCGC CGCGCCTTGA ATTGTTGGAT
GGCGATGCGA CGCCGATTCC GGTAAAGCTG GATATTCTCG CCATTACCTC AACGGCAAAA
ACGATTGATT ATGAGGTCGA GGTTGAACGC TATAACAAAT CCGCGAAACG CGCTTCACTA
CCGCAATTTG CCACGATGAT GGCAGATGAC AGTACGCTGC TTTCGGGTGT TTCCGAGCTG
GATGCTATTC CACCGCAGTC TCAGGTGCTC ACAGAACAAC GGCTGAAGTA TTGGTTTAAA
CTGGCTGACC CACAAACGCG AAATACTTTC CTGCAATGGG CGGAAAAACA ACCATCTTCC
TGA
 
Protein sequence
MKTGIVTTLI ALCLPVSVFA TTLRLSTDVD LLVLDGKKVS SSLLRGADSI ELDNGPHQLV 
FRVEKTIHLS NSEERLYISP PLVVSFNTQL INQVNFRLPR LENEREANHF DAAPRLELLD
GDATPIPVKL DILAITSTAK TIDYEVEVER YNKSAKRASL PQFATMMADD STLLSGVSEL
DAIPPQSQVL TEQRLKYWFK LADPQTRNTF LQWAEKQPSS