| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2144 |
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| Symbol | hyaB |
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| ID | 6146942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2152534 |
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| End bp | 2154327 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641617020 |
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| Product | hydrogenase 1 large subunit |
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| Protein accession | YP_001744195 |
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| Protein GI | 170683907 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.375749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.757738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTC AGTACGAAAC TCAGGGATAC ACCATCAATA ATGCCGGACG CCGCCTGGTG
GTCGACCCGA TTACGCGCAT TGAAGGCCAC ATGCGCTGCG AAGTGAATAT TAACGATCAG
AATGTGATCA CCAATGCCGT CTCCTGCGGC ACCATGTTTC GCGGGCTGGA GATCATCCTG
CAAGGGCGTG ACCCGCGCGA TGCGTGGGCG TTCGTTGAAC GTATCTGCGG CGTCTGTACT
GGCGTACACG CCCTGGCTTC GGTTTACGCC ATCGAAGATG CCATCGGTAT TAAAGTGCCG
GACAACGCCA ATATCATCCG CAACATTATG CTGGCAACGC TCTGGTGCCA CGATCATCTG
GTGCACTTCT ATCAGCTTGC CGGGATGGAT TGGATCGATG TGTTAGATGC GCTGAAAGCC
GACCCGCGGA AAACCTCCGA ACTGGCGCAA AGCCTCTCCT CATGGCCGAA ATCATCCCCT
GGCTATTTCT TCGACGTACA AAACCGCCTG AAGAAATTCG TTGAAGGCGG GCAGTTGGGG
ATCTTCCGCA ATGGCTACTG GGGGCACCCG CAGTACAAAC TGCCGCCAGA AGCCAACCTG
ATGGGCTTTG CCCACTATCT CGAAGCTCTC GATTTCCAGC GTGAAATTGT CAAAATCCAC
GCGGTCTTTG GCGGTAAAAA CCCACATCCA AACTGGATTG TCGGCGGGAT GCCTTGTGCC
ATTAACATTG ACGAAAGCGG CGCGGTCGGG GCGGTCAATA TGGAACGCCT GAACCTGGTG
CAGTCAATCA TTACCCGTAC GGCGGATTTC ATTAACAACG TGATGATCCC CGACGCCTTA
GCCATCGGTC AGTTCAACAA GCCGTGGAGC GAAATCGGCA CTGGCCTTTC GGATAAATGC
GTTCTCAGTT ACGGCGCGTT CCCGGATATC GCCAACGACT TTGGCGAGAA AAGTCTGCTG
ATGCCTGGCG GCGCGGTGAT TAACGGCGAC TTCAACAATG TGCTGCCAGT GGATTTGGTT
GATCCGCAGC AGGTGCAGGA GTTTGTCGAT CACGCCTGGT ATCGTTATCC CAACGATCAG
GTCGGGCGTC ATCCGTTCGA TGGTATTACC GACCCGTGGT ACAACCCCGG CGATGTCAAA
GGCAGCGATA CCAACATTCA GCAGCTGAAT GAACAGGAAC GCTACTCGTG GATCAAAGCG
CCACGCTGGC GCGGTAACGC GATGGAAGTG GGGCCGCTGG CACGCACGTT AATCGCTTAT
CACAAAGGCG ATGCGGCGAC CGTTGAGTCG GTCGATCGCA TGATGTCGGC GTTGAACCTA
CCGCTTTCCG GCATCCAGTC AACGTTAGGC CGCATTTTGT GTCGCGCGCA CGAAGCGCAG
TGGGCCGCAG GCAAGTTGCA ATATTTCTTC GACAAGCTGA TGACCAATCT CAAAAACGGC
AATCTCGCCA CCGCCTCCAC TGAGAAGTGG GAACCAGCAA CCTGGCCGAC AGAGTGCCGT
GGTGTCGGCT TTACCGAAGC GCCGCGCGGA GCGTTAGGCC ACTGGGCCGC CATTCGCGAT
GGCAAGATTG ATCTCTACCA GTGCGTGGTG CCGACCACCT GGAACGCCAG CCCGCGCGAT
CCTAAAGGGC AAATTGGCGC TTATGAAGCG GCGCTGATGA ACACCAAAAT GGCGATCCCC
GAGCAACCGC TGGAGATCCT GCGTACTCTG CACAGCTTTG ATCCGTGCCT CGCCTGTTCA
ACACACGTGC TGGGCGACGA CGGTAGCGAG CTGATCTCCG TGCAGGTGCG TTAA
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| Protein sequence | MSTQYETQGY TINNAGRRLV VDPITRIEGH MRCEVNINDQ NVITNAVSCG TMFRGLEIIL
QGRDPRDAWA FVERICGVCT GVHALASVYA IEDAIGIKVP DNANIIRNIM LATLWCHDHL
VHFYQLAGMD WIDVLDALKA DPRKTSELAQ SLSSWPKSSP GYFFDVQNRL KKFVEGGQLG
IFRNGYWGHP QYKLPPEANL MGFAHYLEAL DFQREIVKIH AVFGGKNPHP NWIVGGMPCA
INIDESGAVG AVNMERLNLV QSIITRTADF INNVMIPDAL AIGQFNKPWS EIGTGLSDKC
VLSYGAFPDI ANDFGEKSLL MPGGAVINGD FNNVLPVDLV DPQQVQEFVD HAWYRYPNDQ
VGRHPFDGIT DPWYNPGDVK GSDTNIQQLN EQERYSWIKA PRWRGNAMEV GPLARTLIAY
HKGDAATVES VDRMMSALNL PLSGIQSTLG RILCRAHEAQ WAAGKLQYFF DKLMTNLKNG
NLATASTEKW EPATWPTECR GVGFTEAPRG ALGHWAAIRD GKIDLYQCVV PTTWNASPRD
PKGQIGAYEA ALMNTKMAIP EQPLEILRTL HSFDPCLACS THVLGDDGSE LISVQVR
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