| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2142 |
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| Symbol | hyaD |
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| ID | 6145585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2151224 |
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| End bp | 2151811 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641617018 |
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| Product | hydrogenase 1 maturation protease |
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| Protein accession | YP_001744193 |
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| Protein GI | 170680751 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.152456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.47053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAGC AACGCGTGGT GGTAATGGGG CTGGGCAACC TGCTGTGGGC CGATGAAGGT
TTCGGCGTGC GGGTGGCGGA ACGGTTGTAT GCCCATTACC ACTGGCCCGA GTATGTGGAG
ATTGTCGATG GCGGTATTCA GGGACTGAAC TTGCTGGGGT ATGTCGAAAG CGCCAGCCAT
CTGTTGATTC TCGATGCCAT TGACTACGGG CTGGAACCTG GAACGCTGCG AACCTATGCC
GGAGAACGTA TTCCGGCTTA TCTCAGCGCG AAGAAAATGA GCCTGCACCA GAACAGTTTC
TCCGAAGTGC TGGCGCTGGC AGATATCCGC GGACATCTGC CAGCACATAT TGCCCTCGTC
GGTCTGCAAC CCGCAATGCT CGACGACTAC GGCGGCAGCC TGAGCGAACT GGCACGGGAG
CAACTGCCCG CAGCGGAACA GGCGGCGCTG GCGCAGTTGG CTGCGTGGGG AATTGTGCCG
CAACCGGCTA ATGAATCGCG CTGTCTCAAT TATGACTGTC TGTCGATGGA AAATTACGAA
GGCGTTCGCT TGCGCCAGTA CAGGATGACG CTGGAGGAGC AGGAATGA
|
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| Protein sequence | MSEQRVVVMG LGNLLWADEG FGVRVAERLY AHYHWPEYVE IVDGGIQGLN LLGYVESASH
LLILDAIDYG LEPGTLRTYA GERIPAYLSA KKMSLHQNSF SEVLALADIR GHLPAHIALV
GLQPAMLDDY GGSLSELARE QLPAAEQAAL AQLAAWGIVP QPANESRCLN YDCLSMENYE
GVRLRQYRMT LEEQE
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