Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2140 |
Symbol | hyaF |
ID | 6144796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2149975 |
End bp | 2150832 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641617016 |
Product | hydrogenase-1 operon protein HyaF |
Protein accession | YP_001744191 |
Protein GI | 170681914 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.634628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.881946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAA CTTTTTTCCA TCTGCTGGGG CCAGGAACGC AACCGAACGA TGACAGTTTC AGCATGAATC CACTGCCGAT CACCTGTCAG GTGAATGATG AACCGAGTAT GGCGGCCCTG GAGCAATGTG CTCACAGCCC GCAGGTGATT GCGCTGTTAA ACGAGTTACA ACATCAACTA AGCGAACGCC AGCCGCCGTT GGGCGAGGTG CTGGCAGTCG ATCTGTTAAA TCTCAACGCC GACGATCGTC ACTTTATCAA TACGCTTCTC GGGGAAGGGG AAGTGTCAGT GCGCATACAG CAGGCTGACG ACAGTGAAAG TGAAATACAG GAGGCGATCT TCTGCGGATT ATGGCGGGTG CGCAGACGTC GCGGCGACAA GTTGCTGGAG GACAAACTGG AGGCTGGCTG CGCGCCGCTG GCATTGTGGC AGGCGGCAAC GCAAAACGTC TTGCCGACAG ATTCGCTGTT ACCGCCGCCC ATTGATGGCC TGATGAATGG CCTACCGTTG GCGCATGAGT TACTGGCGCA TGTACGTAAC CCCGACGCGC AGCCGCACAG CATTAATCTG ACGCAATTAC CCATCAGCGA GGCTGATCGG CTTTTTCTCT CACGTCTCTG TGGGCCGGGA AATATTCAGA TTCGTACCAT TGGCTATGGC GAGAGCTATA TCAACGCCAC GGGGTTACGC CATGTCTGGC ATTTACGCTG TACGGACACC TTAAAAGGCC CGTTACTGGA AAGTTATGAA ATCTGCCCAA TACCGGAAGT GGTGCTGGCA GCGCCAGAAG ATTTGGTCGA CTCTGCGCAG CGGCTTAGCG AGGTATGTCA GTGGCTGGCG GAAGGTGCAC CGACATAA
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Protein sequence | MSETFFHLLG PGTQPNDDSF SMNPLPITCQ VNDEPSMAAL EQCAHSPQVI ALLNELQHQL SERQPPLGEV LAVDLLNLNA DDRHFINTLL GEGEVSVRIQ QADDSESEIQ EAIFCGLWRV RRRRGDKLLE DKLEAGCAPL ALWQAATQNV LPTDSLLPPP IDGLMNGLPL AHELLAHVRN PDAQPHSINL TQLPISEADR LFLSRLCGPG NIQIRTIGYG ESYINATGLR HVWHLRCTDT LKGPLLESYE ICPIPEVVLA APEDLVDSAQ RLSEVCQWLA EGAPT
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