| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2139 |
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| Symbol | appC |
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| ID | 6142814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2148297 |
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| End bp | 2149841 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641617015 |
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| Product | cytochrome bd-II oxidase, subunit I |
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| Protein accession | YP_001744190 |
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| Protein GI | 170680621 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.996707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGATG TCATTGATTT ATCGCGCTGG CAGTTTGCAC TGACCGCGCT GTATCACTTT
TTATTTGTAC CCCTTACCCT GGGGCTGATT TTTTTGCTGG CTATCATGGA AACCATTTAC
GTGGTCACCG GCAAAACAAT CTACCGCGAT ATGACGCGCT TCTGGGGTAA GCTCTTCGGT
ATCAACTTTG CTCTTGGCGT GGCTACCGGC CTGACCATGG AGTTTCAGTT TGGTACTAAC
TGGTCATTCT ATTCCAACTA TGTGGGCGAT ATTTTTGGCG CACCGCTGGC AATGGAAGCA
TTAATGGCCT TCTTCCTCGA ATCCACCTTT GTCGGGCTGT TCTTCTTCGG CTGGCAGCGG
CTGAATAAAT ACCAGCACCT GCTGGTGACG TGGCTGGTGG CGTTCGGTTC AAATCTCTCT
GCATTGTGGA TATTGAATGC CAACGGTTGG ATGCAATACC CGACCGGTGC GCATTTTGAT
ATCGACACCC TGCGTATGGA GATGACCAGT TTCAGCGAGT TGGTCTTTAA CCCGGTCAGC
CAGGTGAAAT TTGTGCACAC CGTAATGGCG GGATACGTGA CCGGGGCCAT GTTTATTATG
GCGATCAGCG CCTGGTATTT ACTGCGCGGA CGGGAGCGCG ATGTCGCATT ACGCTCGTTT
GCCATCGGTT CCGTCTTCGG TACTCTGGCG ATTATCGGTA CGCTGCAACT CGGAGACAGT
TCTGCGTATG AAGTCGCGCA AGTACAACCG GTAAAACTGG CGGCGATGGA AGGGGAGTGG
CAAACAGAAC CTGCACCTGC ACCGTTCCAT GTGGTTGCCT GGCCGGAACA GGATCAAGAG
CGTAACGCCT TTGCCATCAA AATTCCCGCG CTGCTAGGGA TCCTCGCCAC TCACTCATTA
GATAAACCCG TGCCGGGTCT GAAGAATTTG ATGGCTGAAA CCTACCCACG CTTGCAACGC
GGACGTATGG CCTGGCTGTT AATGCAGGAA ATATCGCAAG GCAATCGTGA GCCGCATGTG
TTGCAGGCAT TCCGGGAGCT GGAAGGCGAC CTGGGTTACG GCATGTTGCT CTCCCGCTAT
GCGCCGGATA TGAATCATGT CACAGCCACA CAGTACCAGG CGGCGATGCG TGGCGCGATA
CCTCAGGTTG CGCCGGTATT CTGGAGTTTC CGCATCATGG TAGGCTGTGG TTCCCTGCTG
TTACTGGTGA TGCTGATTGC GCTTGTCCAG ACGCTGCGTG GCAAAATCGA CCAGCATCGC
TGGGTGCTGA AAATGGCGCT CTGGAGTTTG CCGCTTCCGT GGATTGCGAT TGAAGCCGGA
TGGTTTATGA CCGAGTTTGG TCGTCAGCCG TGGGCGATAC AGGACATCTT ACCGACATAC
TCCGCGCACT CCGCCTTAAC CACAGGACAA CTGGCTTTCT CACTGATCAT GATCGTAGGG
CTTTACACCC TGTTCTTAAT CGCCGAAGTC TACCTGATGC AGAAATATGC CCGTCTGGGG
CCGAGCGCGA TGCAGAGTGA ACAACCGACG CAGCAACAGG GGTAA
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| Protein sequence | MWDVIDLSRW QFALTALYHF LFVPLTLGLI FLLAIMETIY VVTGKTIYRD MTRFWGKLFG
INFALGVATG LTMEFQFGTN WSFYSNYVGD IFGAPLAMEA LMAFFLESTF VGLFFFGWQR
LNKYQHLLVT WLVAFGSNLS ALWILNANGW MQYPTGAHFD IDTLRMEMTS FSELVFNPVS
QVKFVHTVMA GYVTGAMFIM AISAWYLLRG RERDVALRSF AIGSVFGTLA IIGTLQLGDS
SAYEVAQVQP VKLAAMEGEW QTEPAPAPFH VVAWPEQDQE RNAFAIKIPA LLGILATHSL
DKPVPGLKNL MAETYPRLQR GRMAWLLMQE ISQGNREPHV LQAFRELEGD LGYGMLLSRY
APDMNHVTAT QYQAAMRGAI PQVAPVFWSF RIMVGCGSLL LLVMLIALVQ TLRGKIDQHR
WVLKMALWSL PLPWIAIEAG WFMTEFGRQP WAIQDILPTY SAHSALTTGQ LAFSLIMIVG
LYTLFLIAEV YLMQKYARLG PSAMQSEQPT QQQG
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