| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2127 |
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| Symbol | torA |
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| ID | 6144206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2134828 |
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| End bp | 2137374 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641617003 |
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| Product | trimethylamine-N-oxide reductase |
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| Protein accession | YP_001744178 |
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| Protein GI | 170684290 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02164] trimethylamine-N-oxide reductase TorA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.600325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATA ACGATCTCTT TCAGGCATCA CGTCGGCGTT TTCTGGCACA ACTCGGCGGC
TTAACCGTCG CCGGGATGCT GGGGCCGTCA TTGTTAACGC CGCGCCGTGC GACTGCGGCG
CAAGCGGCGA CTGAGGCTGT CATCTCGAAA GAGGGCATTC TTACCGGGTC GCACTGGGGG
GCTATCCGCG CGACGGTGAA GGATGGTCGC TTTGTGGCGG CAAAACCGTT CGAACTGGAT
AAATATCCGT CGAAAATGAT TGCCGGATTG CCGGATCACG TACACAACGC GGCGCGTATT
CGTTACCCGA TGGTACGCGT GGACTGGCTA CGTAAGCGCC ATCTGAGCGA CACTTCCCAG
CGCGGTGATA ACCGTTTTGT GCGCGTGAGC TGGGATGAAG CCCTCGACAT GTTCTATGAA
GAACTGGAAC GCGTACAGAA AACTCACGGG CCGAGTGCCT TGCTGACCGC CAGTGGTTGG
CAATCGACGG GGATGTTCCA TAACGCTTCG GGGATGCTGG CGAAAGCTAT TGCCTTGCAT
GGTAATAGCG TTGGTACGGG CGGAGATTAC TCTACCGGTG CTGCGCAGGT GATCCTGCCG
CGCGTGGTTG GCTCAATGGA AGTGTATGAA CAGCAAACCT CCTGGCCGCT GGTATTGCAG
AACAGCAAAA CCATTGTGCT GTGGGGCTCT GATTTGCTGA AAAACCAGCA AGCGAACTGG
TGGTGCCCGG ATCACGATGT TTATGAATAT TACGCGCAGT TGAAAGCGAA AGTCGCCGCC
GGTGAAATTG AGGTCATCAG CATCGATCCG GTTGTCACAT CCACCCATGA GTATCTGGGG
CGCGAGCATG TGAAGCACAT TGCTGTTAAC CCGCAAACTG ACGTGCCACT GCAACTGGCG
CTGGCGTATA CGCTGTACAG TGAAAACCTG TACGACAAAA ACTTCCTCGC TAACTACTGT
GTGGGGTTTG AGCAGTTCCT GCCGTATCTG CTGGGTGAGA AAGACGGTCA GCCGAAAGAT
GCCGCATGGG CTGAAAAACT GACCGGCATT GATGCCGAAA CCATTCGTGG GCTGGCGCGG
CAGATGGCGG CGAACAGAAC GCAGATTATT GCTGGCTGGT GCGTACAGCG TATGCAGCAC
GGTGAACAGT GGGCGTGGAT GATTGTCGTT CTGGCGGCGA TGCTGGGGCA AATTGGCCTG
CCAGGTGGTG GCTTTGGTTT TGGCTGGCAC TATAACGGCG CAGGCACGCC GGGGCGTAAA
GGCGTTATTC TGAGTGGTTT CTCCGGCTCT ACGTCGATTT CGCCTGTTCA CGACAACAGT
GATTACAAAG GTTACAGCAG CACCATTCCG ATTGCCCGTT TTATCGATGC GATCCTCGAA
CCGGGGAAAG TGATCAACTG GAACGGTAAA TCGGTAAAAC TGCCGCCGCT GAAAATGTGT
ATTTTTGCCG GAACTAACCC GTTCCATCGC CATCAGCAGA TCAACCGCAT TATTGAAGGC
TGGCGCAAGC TGGAAACGGT TATCGCCATA GATAACCAGT GGACCTCAAC CTGCCGCTTT
GCCGATATCG TACTGCCTGC GACCACGCAG TTTGAGCGTA ACGATCTCGA CCAGTACGGT
AACCACTCTA ACCGTGGCAT TATCGCCATG AAACAGGTCG TGCCGCCGCA GTTTGAGGCG
CGCAACGACT TTGATATTTT CCGCGAGCTG TGCCGTCGCT TTAATCGCGA AGAAGCCTTT
ACCGAAGGGC TGGACGAAAT GGGCTGGCTG AAACGCATCT GGCAGGAAGG TGTACAACAG
GGCAAAGGAC GCGGCGTTCA TCTGCCAGCG TTTGATGACT TCTGGAATAA CAAAGAGTAT
GTCGAGTTTG ACCATCCGCA GATGTTTGTT CGCCACCAGG CATTCCGCGA AGATCCGGAT
CTCGAACCGC TGGGCACGCC GAGTGGCCTG ATTGAGATCT ACTCGAAAAC CATCGCCGAT
ATGAACTACG ACGATTGTCA GGGGCATCCG ATGTGGTTTG AGAAAATCGA ACGCTCCCAC
GGCGGGCCCG GCTCGCAGAA GTATCCGTTG CATCTGCAAT CTGTGCATCC GGATTTCCGA
CTTCACTCGC AGTTATGTGA GTCGGAAACT CTGCGTCAGC AATATACGGT AGCGGGTAAA
GAGCCAGTGT TCATTAACCC GCAGGATGCC AGCGCGCGCG GTATTCGTAA CGGTGATGTG
GTACGCGTCT TTAACGCTCG CGGTCAGGTG TTGGCTGGGG CAGTGGTTTC TGACCGCTAT
GCACCCGGCG TGGCACGAAT TCATGAAGGG GCATGGTACG ATCCAGATAA AGGCGGCGAG
CCTGGTGCGC TGTGCAAATA CGGTAATCCC AACGTGTTGA CCATTGACAT CGGTACTTCG
CAGTTGGCGC AGGCGACCAG TGCGCACACT ACGCTGGTGG AAATTGAGAA GTACAACGGA
ACAGTGGAGC AGGTAACGGC GTTTAACGGC CCCGTGGAGA TGGTGGCGCA GTGTGAATAT
GTTCCCGCGT CGCAGGTGAA ATCATGA
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| Protein sequence | MNNNDLFQAS RRRFLAQLGG LTVAGMLGPS LLTPRRATAA QAATEAVISK EGILTGSHWG
AIRATVKDGR FVAAKPFELD KYPSKMIAGL PDHVHNAARI RYPMVRVDWL RKRHLSDTSQ
RGDNRFVRVS WDEALDMFYE ELERVQKTHG PSALLTASGW QSTGMFHNAS GMLAKAIALH
GNSVGTGGDY STGAAQVILP RVVGSMEVYE QQTSWPLVLQ NSKTIVLWGS DLLKNQQANW
WCPDHDVYEY YAQLKAKVAA GEIEVISIDP VVTSTHEYLG REHVKHIAVN PQTDVPLQLA
LAYTLYSENL YDKNFLANYC VGFEQFLPYL LGEKDGQPKD AAWAEKLTGI DAETIRGLAR
QMAANRTQII AGWCVQRMQH GEQWAWMIVV LAAMLGQIGL PGGGFGFGWH YNGAGTPGRK
GVILSGFSGS TSISPVHDNS DYKGYSSTIP IARFIDAILE PGKVINWNGK SVKLPPLKMC
IFAGTNPFHR HQQINRIIEG WRKLETVIAI DNQWTSTCRF ADIVLPATTQ FERNDLDQYG
NHSNRGIIAM KQVVPPQFEA RNDFDIFREL CRRFNREEAF TEGLDEMGWL KRIWQEGVQQ
GKGRGVHLPA FDDFWNNKEY VEFDHPQMFV RHQAFREDPD LEPLGTPSGL IEIYSKTIAD
MNYDDCQGHP MWFEKIERSH GGPGSQKYPL HLQSVHPDFR LHSQLCESET LRQQYTVAGK
EPVFINPQDA SARGIRNGDV VRVFNARGQV LAGAVVSDRY APGVARIHEG AWYDPDKGGE
PGALCKYGNP NVLTIDIGTS QLAQATSAHT TLVEIEKYNG TVEQVTAFNG PVEMVAQCEY
VPASQVKS
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