Gene EcSMS35_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2118 
Symbol 
ID6146174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2126451 
End bp2126945 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content59% 
IMG OID641616994 
Productputative flavin reductase rutF 
Protein accessionYP_001744169 
Protein GI170680483 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID[TIGR03615] pyrimidine utilization flavin reductase protein F 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTG TCGATCAACA AACTTTTCGC GATGCGATGT CCTGCATGGG CGCGGCGGTC 
AATATCATCA CCACGGACGG TCCAGCCGGG CGCGCCGGGT TCACCGCCAG CGCCGTCTGC
AGCGTGACCG ATACGCCGCC CACATTACTG GTGTGCCTGA ATCGTGGGGC GTCCGTCTGG
CCGGTATTCA ATGAAAATCG AACGCTGTGT GTAAATACAC TTAGCGCCGG GCAGGAGCCG
CTTTCAAACC TTTTTGGCGG CAAAACGCCC ATGGAACACC GCTTTGCCGC CGCCCGCTGG
CAGACGGGTG TGACCGGATG CCCGCAACTG GAAGAAGCAC TGGTTTCGTT TGACTGCCGT
ATCAGCCAGG TGGTGAGCGT CGGCACCCAC GACATTCTGT TTTGCGCCAT CGAAGCGATT
CATCGTCACG CCACCCCCTA CGGGCTGGTG TGGTTTGATC GCAGTTATCA CGCGCTGATG
CGCCCTGCTT GTTAA
 
Protein sequence
MNIVDQQTFR DAMSCMGAAV NIITTDGPAG RAGFTASAVC SVTDTPPTLL VCLNRGASVW 
PVFNENRTLC VNTLSAGQEP LSNLFGGKTP MEHRFAAARW QTGVTGCPQL EEALVSFDCR
ISQVVSVGTH DILFCAIEAI HRHATPYGLV WFDRSYHALM RPAC