| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2115 |
|---|
| Symbol | |
|---|
| ID | 6147337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 2124647 |
|---|
| End bp | 2125033 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641616991 |
|---|
| Product | rutC protein |
|---|
| Protein accession | YP_001744166 |
|---|
| Protein GI | 170680387 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | [TIGR03610] pyrimidine utilization protein C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAT CCGTAATTAT TCCCGCTGGC AGCAGCGCAC CGCTGGCCCC CTTCGTTCCC
GGCACGCTGG CTGATGGCGT GGTGTATGTC TCCGGTACGC TGGCTTTTGA TCAACATAAT
AACGTGCTGT TTGCCGATGA CCCAAAGGCG CAAACCCGCC ACGTTCTGGA AACCATCCGC
AAGGTGATCG AGACGGCGGG TGGCACAATG GCGGATGTGA CCTTCAACAG CATCTTTATT
ACCGACTGGA AAAATTACGC CGCGATTAAC GAAATCTACG CCGAGTTTTT TCCGGGTGAT
AAACCGGCGC GATTCTGCAT TCAGTGCGGA CTGGTAAAAC CTGACGCACT GGTGGAAATC
GCCACAATTG CGCATATCGC CAAGTGA
|
|---|
| Protein sequence | MPKSVIIPAG SSAPLAPFVP GTLADGVVYV SGTLAFDQHN NVLFADDPKA QTRHVLETIR
KVIETAGGTM ADVTFNSIFI TDWKNYAAIN EIYAEFFPGD KPARFCIQCG LVKPDALVEI
ATIAHIAK
|
|---|
| |