Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2114 |
Symbol | |
ID | 6144242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2123940 |
End bp | 2124635 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641616990 |
Product | putative isochorismatase family protein, rutB |
Protein accession | YP_001744165 |
Protein GI | 170683118 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | [TIGR03614] pyrimidine utilization protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACGA CCTTAACCGC TCGACCGGAA GCCATTACCT TCGATCCGCA GCAAACTGCG CTGATCGTGG TGGATATGCA AAACGCTTAT GCCACGCCAG GCGGCTACTT AGATCTCGCC GGGTTTGATG TCTCAACCAC TCGCCCGGTC ATTGCCAACA TTCAAACCGC CGTGACCGCA GCGCGAGCGG CAGGGATGCT GATCATCTGG TTTCAAAATG GCTGGGATGC ACAGTATGTC GAGGCTGGCG GCCCCGGCTC ACCGAATTTT CATAAATCGA ACGCCCTGAA AACCATGCGT AAGCAGCCGC AGCTGCAGGG GAAATTGCTG GCGAAAGGCT CCTGGGATTA TCAACTGGTG GATGAACTGG TGCCGCAGCC TGGCGATATT GTGCTGCCGA AGCCGCGCTA CAGCGGTTTC TTCAATACGC CGCTGGACAG CATTTTGCGC AGCCGTGGAA TACGCCATCT GGTTTTCACC GGTATCGCTA CCAACGTCTG CGTCGAATCG ACGCTACGCG ATGGCTTTTT TCTGGAGTAT TTCGGCGTGG TGTTGGAAGA CGCAACACAC CAGGCGGGGC CGGAATTTGC ACAGAAAGCT GCGTTGTTCA ATATCGAAAC CTTTTTTGGC TGGGTCAGCG ACGTCGAAAC GTTCTGCGAC GCGCTTTCTC CCACGTCCTT TGCTCGTATC GCTTAA
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Protein sequence | MMTTLTARPE AITFDPQQTA LIVVDMQNAY ATPGGYLDLA GFDVSTTRPV IANIQTAVTA ARAAGMLIIW FQNGWDAQYV EAGGPGSPNF HKSNALKTMR KQPQLQGKLL AKGSWDYQLV DELVPQPGDI VLPKPRYSGF FNTPLDSILR SRGIRHLVFT GIATNVCVES TLRDGFFLEY FGVVLEDATH QAGPEFAQKA ALFNIETFFG WVSDVETFCD ALSPTSFARI A
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