Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2090 |
Symbol | csgB |
ID | 6144044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2102890 |
End bp | 2103372 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641616966 |
Product | curlin minor subunit |
Protein accession | YP_001744142 |
Protein GI | 170684268 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.230335 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGACC AGGTCCAGGG TGACAACATG AAAAACAAAT TGTTATTTAT GATGTTAACA ATACTGGGTG CGCCTGGGAT TGCAGCCGCA GCAGGTTATG ATTTAGCTAA TTCAGAATAT AACTTCGCGG TAAATGAATT GAGTAAGTCT TCATTTAATC AGGCAGCCAT AATTGGTCAA GCTGGGACTA ATAATAGTGC TCAGTTACGG CAGGGAGGCT CAAAACTTTT GGCGGTTGTT GCGCAAGAAG GTAGTAGCAA CCGGGCAAAG ATTGACCAGA CAGGAGATTA TAACCTTGCA TATATTGATC AGGCGGGCAA TGCCAACGAT GCCAGTATTT CGCAAGGTGC TTATGGTAAT ACTGCGATGA TTATCCAGAA AGGTTCTGGT AATAAAGCAA ATATTACACA GTATGGTACT CAAAAAACGG CAATTGTAGT GCAGAGACAG TCGCAAATGG CTATTCGCGT GACACAACGT TAA
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Protein sequence | MYDQVQGDNM KNKLLFMMLT ILGAPGIAAA AGYDLANSEY NFAVNELSKS SFNQAAIIGQ AGTNNSAQLR QGGSKLLAVV AQEGSSNRAK IDQTGDYNLA YIDQAGNAND ASISQGAYGN TAMIIQKGSG NKANITQYGT QKTAIVVQRQ SQMAIRVTQR
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