| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2085 |
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| Symbol | |
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| ID | 6143510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2099521 |
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| End bp | 2100942 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641616961 |
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| Product | phopholipase D |
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| Protein accession | YP_001744137 |
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| Protein GI | 170682775 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.169577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.374109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCCGGC TGGCGAGCGC GGTGCTGCCA CTGTGTTCGC AACATCCCGG TCAGTGTGGC
CTTTTTCCTC TGGAGAAAAG TCTGGATGCG TTTGCCGCCC GGTATCGTCT GGCCGAAATG
GCAGAGCATA CGCTGGATGT TCAGTATTAC ATCTGGCAGG ACGATATGTC GGGTCGGTTA
CTGTTTTCCG CCCTGTTAGC CGCAGCAAAG CGTGGCGTTC GCGTCCGTTT GTTGCTGGAC
GACAACAATA CGCCCGGACT TGACGACATT TTACGCTTGC TTGACAGTCA TCCACGCATT
GAAGTCCGGC TTTTTAATCC TTTCTCGTTT CGCTTGCTAC GTCCGCTTGG TTATATCACC
GACTTTTCCC GTCTCAATCG CCGTATGCAC AATAAAAGTT TCACTGTCGA TGGCGTGGTT
ACCCTGGTGG GAGGACGAAA TATTGGTGAT GCCTATTTTG GGGCAGGGGA AGAGCCACTT
TTTTCGGATT TAGATGTCAT GGCAATAGGA CCGGTGGTAG AGGACGTTGC CGATGATTTC
GCCCGCTACT GGTATTGCAA ATCGGTTTCA CCCTTACAGC AGGTGCTGGA TGTCACGGAA
GGTGAAATGG CGGATCGCAT CGAGTTACCC GCCTCCTGGC ATAACGATGC CATGACGCAT
CGTTATTTAC GCAAAATGGA ATCCAGTCCG TTTATAAATC ATCTGGTTGA TGGAACGTTG
CCGCTTATCT GGGCGAAGAC ACGTTTATTA AGTGATGATC CGGCGAAAGG GGAGGGCAAG
GCAAAACGGC ATTCACTGTT ACCGCAGCGC CTGTTCGATA TCATGGGCTC ACCCAGTGAA
CGCATCGATA TTATCTCTTC CTATTTTGTA CCGACACGCG CAGGTGTGGC GCAACTCTTA
CGTATGGTGA GAAAAGGGGT AAAGATTGCG ATCCTAACCA ATTCTCTTGC CGCTAACGAT
GTTGCTGTCG TCCATGCCGG ATACGCACGC TGGCGCAAAA AATTGCTCCG CTACGGCGTG
GAATTATATG AACTCAAGCC GACGCGTGAA CAAAGTAGTA CGTTACACGA TCGCGGCATC
ACCGGTAATT CCGGTGCCAG CCTGCATGCT AAAACCTTTA GCATCGATGG TAAAACGGTG
TTTATCGGCT CTTTCAATTT CGATCCGCGT TCGACATTGC TCAATACTGA AATGGGCTTC
GTGATAGAGA GCGAAACGCT GGCACAGTTA ATTGATAAAC GCTTTATTCA GAGCCAGTAT
GATGCGGCCT GGCAGCTCCG TCTGGACAGG TGGGGACGGA TCAACTGGGT TGATCGTCAT
GCAAAGAAAG AGATTGTTCT CAAAAAAGAA CCCGCCACCA GTTTCTGGAA GCGGGTTATG
GTCAGACTGG CGTCGATATT GCCCGTGGAA TGGTTATTAT AA
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| Protein sequence | MPRLASAVLP LCSQHPGQCG LFPLEKSLDA FAARYRLAEM AEHTLDVQYY IWQDDMSGRL
LFSALLAAAK RGVRVRLLLD DNNTPGLDDI LRLLDSHPRI EVRLFNPFSF RLLRPLGYIT
DFSRLNRRMH NKSFTVDGVV TLVGGRNIGD AYFGAGEEPL FSDLDVMAIG PVVEDVADDF
ARYWYCKSVS PLQQVLDVTE GEMADRIELP ASWHNDAMTH RYLRKMESSP FINHLVDGTL
PLIWAKTRLL SDDPAKGEGK AKRHSLLPQR LFDIMGSPSE RIDIISSYFV PTRAGVAQLL
RMVRKGVKIA ILTNSLAAND VAVVHAGYAR WRKKLLRYGV ELYELKPTRE QSSTLHDRGI
TGNSGASLHA KTFSIDGKTV FIGSFNFDPR STLLNTEMGF VIESETLAQL IDKRFIQSQY
DAAWQLRLDR WGRINWVDRH AKKEIVLKKE PATSFWKRVM VRLASILPVE WLL
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