Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2073 |
Symbol | |
ID | 6143306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2088176 |
End bp | 2088817 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641616949 |
Product | nickel-dependent hydrogenase b-type cytochrome subunit |
Protein accession | YP_001744125 |
Protein GI | 170679945 |
COG category | [C] Energy production and conversion |
COG ID | [COG3038] Cytochrome B561 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.636056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.331643 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTATTTT TGTGTTGCAA TTCATTCTCC GACACGCCAT TTTCTTTCTC TCGCAAATTC GTTTTGGATG CACTTATGTC ATTCACAAAT ACCCCTGAAC GCTATGGTGT TATATCTGCG GCCTTACATT GGATAAGCGC AATTATTGTC TACGGCATGT TTGCTTTAGG TCTGTGGATG GTCACGCTCA GTTATTACGA TGGCTGGTAT CACAAAGCAC CCGAACTGCA TAAAAGCATC GGTATTTTGT TAATGATGGG GCTGGTTATT CGCGTTCTGT GGCGCGTCAT ATCTCCACCG CCGGGTCCGC TGCAAAGTTA TTCGTCAATG ACTCGTCTTG GCGCAAAGGC TGGACATCTC GCATTGTACC TATTGCTGTT CGCCATCGGC ATCAGCGGCT ATCTGATCTC AACTGCCGAT GGTAAACCGA TCAGCGTTTT TGGCTGGTTT GACGTCCCCG CGACCCTCGC CGACGCTGGC GCACAGGCTG ACTTTGCCGG TGCCCTGCAT TTTTGGCTCG CGTGGAGCGT CGTAGTACTG TCCGTTATGC ATGGATTTAT GGCCCTGAAG CATCATTTCA TCGATAAAGA CGACACTCTG AAGCGCATGC TGGGAAAGTC GTCATCTGAC TATGGAGTAT AA
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Protein sequence | MLFLCCNSFS DTPFSFSRKF VLDALMSFTN TPERYGVISA ALHWISAIIV YGMFALGLWM VTLSYYDGWY HKAPELHKSI GILLMMGLVI RVLWRVISPP PGPLQSYSSM TRLGAKAGHL ALYLLLFAIG ISGYLISTAD GKPISVFGWF DVPATLADAG AQADFAGALH FWLAWSVVVL SVMHGFMALK HHFIDKDDTL KRMLGKSSSD YGV
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