| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2035 |
|---|
| Symbol | fabD |
|---|
| ID | 6145963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2055870 |
|---|
| End bp | 2056799 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641616911 |
|---|
| Product | malonyl CoA-acyl carrier protein transacylase |
|---|
| Protein accession | YP_001744087 |
|---|
| Protein GI | 170683344 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000142679 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.000000651036 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAT TTGCATTTGT GTTCCCTGGA CAGGGTTCTC AAACCGTTGG AATGCTGGCT
GATATGGCGG CGAGCTATCC AATTGTCGAA GAAACGTTTG CTGAAGCTTC TGCGGCGCTG
GGCTACGACC TGTGGGCGCT GACCCAGCAG GGGCCAGCTG AAGAACTGAA TAAAACCTGG
CAAACCCAGC CAGCGCTGTT GACTGCATCT GTTGCGCTGT ATCGCGTATG GCAGCAGCAG
GGCGGTAAAG CACCGGCAAT GATGGCTGGT CACAGCCTGG GGGAATACTC CGCGCTGGTT
TGCGCTGGTG TGATTGATTT CGCTGATGCG GTGCGTCTGG TTGAGATGCG CGGCAAGTTC
ATGCAAGAAG CCGTACCGGA AGGAACGGGC GCTATGGCGG CAATCATCGG TCTGGATGAT
GCGTCTATTG CGAAAGCGTG TGAAGAAGCT GCAGAAGGTC AGGTCGTTTC TCCGGTAAAC
TTTAACTCTC CGGGACAGGT GGTTATTGCC GGTCATAAAG AAGCAGTTGA GCGTGCTGGC
GCTGCCTGTA AAGCTGCGGG CGCAAAACGC GCTCTACCGT TACCAGTGAG CGTACCGTCT
CACTGTGCGC TGATGAAACC AGCAGCCGAC AAACTGGCAG TAGAATTAGC GAAAATCACC
TTTAACGCAC CAACAGTTCC TGTTGTGAAT AACGTTGATG TGAAATGCGA AACCAATGGT
GATGCCATCC GTGACGCACT GGTACGTCAG TTGTATAACC CGGTTCAGTG GACGAAGTCT
GTTGAATACA TGGCAGCGCA AGGCGTAGAA CATCTCTATG AAGTCGGCCC GGGCAAAGTG
CTTACTGGCC TGACGAAACG CATTGTCGAC ACCCTGACCG CCTCGGCGCT GAACGAACCT
TCAGCGATGG CAGCGGCGCT CGAGCTTTAA
|
|---|
| Protein sequence | MTQFAFVFPG QGSQTVGMLA DMAASYPIVE ETFAEASAAL GYDLWALTQQ GPAEELNKTW
QTQPALLTAS VALYRVWQQQ GGKAPAMMAG HSLGEYSALV CAGVIDFADA VRLVEMRGKF
MQEAVPEGTG AMAAIIGLDD ASIAKACEEA AEGQVVSPVN FNSPGQVVIA GHKEAVERAG
AACKAAGAKR ALPLPVSVPS HCALMKPAAD KLAVELAKIT FNAPTVPVVN NVDVKCETNG
DAIRDALVRQ LYNPVQWTKS VEYMAAQGVE HLYEVGPGKV LTGLTKRIVD TLTASALNEP
SAMAAALEL
|
|---|
| |