Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2027 |
Symbol | |
ID | 6145435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2048953 |
End bp | 2049750 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641616903 |
Product | putative metallodependent hydrolase |
Protein accession | YP_001744079 |
Protein GI | 170681009 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000195857 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00000164226 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTTTAG TCGACTCACA CTGCCATCTC GATGGTCTGG ATTATGAATC TTTGCATAAG GACGTGGATG ACGTTCTGGC GAAAGCCGCC GCACGCGATG TGAAATTTTG TCTGGCAGTC GCCACAACAT TACCGGGTTA TTTACACATG CGGGATCTGG TAGGCGAACG TGACAACGTC GTATTTTCTT GTGGCGTGCA TCCACTCAAC CAGAATGATC CCTACGATGT AGAAGATTTA CGCCGTCTGG CGGCAGAAGA GGGCGTTGTT GCGCTGGGTG AAACCGGGCT GGATTATTAT TACACGCCGG AAACTAAAGT ACGTCAGCAA GAGTCCTTCA TCCATCATAT CCAGATTGGT CGTGAACTGA ACAAGCCGGT TATCGTCCAC ACCCGTGACG CCCGCGCCGA TACGCTGGCA ATTCTGCGCG AAGAAAAAGT GACGGATTGC GGTGGCGTAC TACACTGTTT TACAGAGGAT AGAGAAACGG CGGGTAAATT ACTGGATCTC GGATTTTACA TCTCCTTTTC CGGCATTGTG ACCTTCCGTA ATGCGGAGCA ACTGCGCGAT GCTGCGCGTT ATGTCCCCCT GGATCGGTTA CTGGTGGAAA CTGACTCACC TTACCTTGCG CCGGTACCGC ATCGAGGAAA AGAGAATCAA CCTGCGATGG TTCGTGACGT TGCAGAATAC ATGGCTGTGT TGAAAGGTGT TGCCGTTGAA GAACTGGCGC AGGTAACCAC CGATAACTTC GCCCGTCTGT TTCACATCGA CGCTTCCCGC CTTCAATCCA TCCGTTGA
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Protein sequence | MFLVDSHCHL DGLDYESLHK DVDDVLAKAA ARDVKFCLAV ATTLPGYLHM RDLVGERDNV VFSCGVHPLN QNDPYDVEDL RRLAAEEGVV ALGETGLDYY YTPETKVRQQ ESFIHHIQIG RELNKPVIVH TRDARADTLA ILREEKVTDC GGVLHCFTED RETAGKLLDL GFYISFSGIV TFRNAEQLRD AARYVPLDRL LVETDSPYLA PVPHRGKENQ PAMVRDVAEY MAVLKGVAVE ELAQVTTDNF ARLFHIDASR LQSIR
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