Gene EcSMS35_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2013 
Symbol 
ID6147057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2036139 
End bp2037098 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content53% 
IMG OID641616889 
ProductLysM/ErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001744065 
Protein GI170681577 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00035713 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAAAA CGCATTTTTC TCGCTGGCTA ACGTTTTTTA CGTTCGCCGC TGCCGTGGCG 
CTGGCGCTAC CGGCAAAAGC CAACACCTGG CCGCTGCCGC CTGCGGGCAG TCGTCTGGTT
GGTGAAAACA AATTTCATGT TGTGGAAAAT GACGGTGGTT CTCTGGAAGC CATCGCCAAA
AAATATAACG TCGGCTTTCT CGCGCTGTTA CAGGCTAACC CCGGCGTTGA TCCTTACGTA
CCGCGCGCGG GTAGCGTGTT AACGATCCCG TTGCAAACCC TACTTCCAGA CGCGCCGCGT
GAAGGCATTG TGATCAACAT TGCGGAGCTG CGTCTCTATT ACTACCCGCC GGGTAAAAAT
TCGGTAACCG TGTATCCCAT CGGCATTGGT CAGTTGGGTG GTGACACGCT GACACCAACA
ATGGTGACCA CCGTTTCAGA CAAACGTGCA AACCCAACCT GGACGCCAAC GGCAAACATC
CGCGCCCGTT ATAAAGCACA GGGAATTGAG TTGCCTGCGG TAGTGCCGGC TGGACCGGAT
AACCCAATGG GCCATCATGC GATTCGTCTG GCGGCCTATG GCGGCGTTTA TTTGCTTCAT
GGTACGAACG CCGATTTCGG CATTGGCATG CGGGTAAGTT CTGGCTGTAT TCGTCTGCGG
GATGACGATA TCAAAACACT CTTTAGCCAG GTCACCCCAG GCACCAAAGT GAATATCATC
AACACTCCGA TAAAAGTCTC TGCCGAACCA AACGGTGCGC GTCTGGTTGA AGTACATCAG
CCGCTGTCTG AGAAGATTGA TGACGATCCG CAGCTGCTGC CAATTACGCT GAATAGCGCA
ATGCAATCAT TTAAAGATGC AGCACAAACT GACGCTGAAG TGATGCAACA TGTGATGGAT
GTCCGTTCCG GGATGCCGGT GGATGTCCGC CGTCATCAAG TGAGCCCACA AACTCTGTAA
 
Protein sequence
MIKTHFSRWL TFFTFAAAVA LALPAKANTW PLPPAGSRLV GENKFHVVEN DGGSLEAIAK 
KYNVGFLALL QANPGVDPYV PRAGSVLTIP LQTLLPDAPR EGIVINIAEL RLYYYPPGKN
SVTVYPIGIG QLGGDTLTPT MVTTVSDKRA NPTWTPTANI RARYKAQGIE LPAVVPAGPD
NPMGHHAIRL AAYGGVYLLH GTNADFGIGM RVSSGCIRLR DDDIKTLFSQ VTPGTKVNII
NTPIKVSAEP NGARLVEVHQ PLSEKIDDDP QLLPITLNSA MQSFKDAAQT DAEVMQHVMD
VRSGMPVDVR RHQVSPQTL