| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2006 |
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| Symbol | npdA |
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| ID | 6143561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2026169 |
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| End bp | 2026990 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641616882 |
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| Product | NAD-dependent deacetylase |
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| Protein accession | YP_001744058 |
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| Protein GI | 170683527 |
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| COG category | [K] Transcription |
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| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.423996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.175546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGTCGC GTCGGGGTCA TCGGTTAAGT CGTTTTCGTA AAAATAAACG CCGCCTGCGC
GAGCGTTTGC GTCAGCGTAT TTTTTTCAGA GATAAAGTGG TGCCGGAAGC AATGGAAAAA
CCAAGAGTAC TCGTACTGAC AGGGGCAGGG ATTTCTGCGG AATCAGGTAT TCGTACCTTT
CGCGCCGCAG ATGGCCTGTG GGAAGAACAT CGGGTTGAAG ATGTGGCAAC GCCGGAAGGT
TTTGATCGCG ATCCTGAACT GGTGCAAGCG TTTTATAACG CCCGTCGCCG ACAGCTGCAG
CAGCCAGAAA TTCAGCCTAA CGCCGCGCAT CTTGCGCTGG CTAAACTGCA AGACGCCCTC
GGCGATCGCT TTTTGCTGGT GACGCAGAAT ATCGACAACC TTCATGAGCG TGCCGGTAAC
ACCAATGTTA TTCATATGCA TGGGGAACTG CTGAAAGTTC GTTGTTCACA AAGTGGTCAG
GTTCTCGACT GGACCGGAGA CGTTACCCCA GAAGATAAAT GCCATTGCTG CCAGTTCCCG
GCACCCTTGC GACCGCACGT AGTGTGGTTT GGCGAAATGC CACTCGGCAT GGATGAAATT
TATATGGCGT TGTCGATGGC CGATATTTTC ATTGCCATTG GTACTTCGGG GCATGTTTAT
CCAGCGGCTG GGTTTGTTCA CGAAGCGAAA CTGCATGGCG CGCACACCGT GGAACTGAAT
CTTGAACCAA GTCAGGTCGG TAATGAATTT GCCGAGAAAT ATTACGGCCC GGCAAGCCAG
GTGGTGCCAG AATTTGTTGA AAAGTTGCTG AAGGGATTAT AA
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| Protein sequence | MLSRRGHRLS RFRKNKRRLR ERLRQRIFFR DKVVPEAMEK PRVLVLTGAG ISAESGIRTF
RAADGLWEEH RVEDVATPEG FDRDPELVQA FYNARRRQLQ QPEIQPNAAH LALAKLQDAL
GDRFLLVTQN IDNLHERAGN TNVIHMHGEL LKVRCSQSGQ VLDWTGDVTP EDKCHCCQFP
APLRPHVVWF GEMPLGMDEI YMALSMADIF IAIGTSGHVY PAAGFVHEAK LHGAHTVELN
LEPSQVGNEF AEKYYGPASQ VVPEFVEKLL KGL
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