| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1997 |
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| Symbol | |
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| ID | 6146077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2018270 |
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| End bp | 2019391 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641616873 |
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| Product | cupin family protein |
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| Protein accession | YP_001744049 |
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| Protein GI | 170680524 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2850] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.446284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATACC AACTCACTCT TAACTGGCCC GATTTTCTTG AACGTCACTG GCAGAAACGC
CCGGTGGTGT TAAAACGCGG CTTTAATAAT TTTATTGACC CGATCTCTCC AGACGAGTTG
GCGGGTCTGG CGATGGAAAG CGAAGTCGAC AGTCGACTGG TCAGTCATCA GGATGGCAAA
TGGCAGGTCA GCCACGGTCC ATTCGAAAGC TACGATCATC TCGGTGAAAC TAACTGGTCA
TTGTTAGTGC AAGCAGTGAA CCACTGGCAT GAGCCGACCG CCGCGCTAAT GCGACCGTTC
CGTGAACTAC CGGACTGGCG TATTGATGAT CTGATGATCT CTTTTTCTGT ACCAGGCGGC
GGCGTCGGCC CGCATCTCGA TCAGTACGAC GTGTTTATCA TTCAGGGTAC CGGACGTCGT
CGCTGGCGAG TGGGCGAAAA GCTGCAAATG AAACAGCACT GCCCGCACCC GGATCTGTTA
CAGGTCGATC CGTTCGAAGC CATCATCGAT GAAGAGCTGG AGCCTGGCGA TATTCTTTAT
ATTCCGCCAG GATTCCCGCA TGAAGGCTAC GCGCTGGAAA ATGCGATGAA CTATTCCGTA
GGTTTTCGCG CGCCAAATAC GCGGGAACTG ATTAGCGGAT TTGCCGATTA TGTGCTGCAA
CGTGAACTGG GCGGCAACTA CTACAGCGAT CCTGATGTTC CACCTCGCGC TCATCCTGCG
GATGTTCTGC CGCAAGAGAT GGATAAACTG CGTGAGATGA TGCTCGAATT GATCAACCAG
CCGGAACACT TTAAGCAATG GTTTGGGGAG TTTATATCCC AGTCACGTCA TGAACTGGAT
ATCGCGCCGC CAGAGCCGCC TTATCAGCCG GATGAAATCT ACGATGCGCT GAAACAAGGT
GATGTGCTGG TGCGCCTGGG TGGTCTACGC GTATTGCGCA TTGGCGACGA CGTGTATGCC
AATGGTGAGA AGATCGATTC CCCGCACCGT CCGGCACTGG ATGCACTCGC CAGCAACATT
GCGCTGACTG CGGAGAATTT TGGCGATGCG CTGGAAGATC CGTCATTCCT CGCGATGCTC
GCGGCGCTGG TCAATAGCGG ATACTGGTTC TTCGAAGGGT AA
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| Protein sequence | MEYQLTLNWP DFLERHWQKR PVVLKRGFNN FIDPISPDEL AGLAMESEVD SRLVSHQDGK
WQVSHGPFES YDHLGETNWS LLVQAVNHWH EPTAALMRPF RELPDWRIDD LMISFSVPGG
GVGPHLDQYD VFIIQGTGRR RWRVGEKLQM KQHCPHPDLL QVDPFEAIID EELEPGDILY
IPPGFPHEGY ALENAMNYSV GFRAPNTREL ISGFADYVLQ RELGGNYYSD PDVPPRAHPA
DVLPQEMDKL REMMLELINQ PEHFKQWFGE FISQSRHELD IAPPEPPYQP DEIYDALKQG
DVLVRLGGLR VLRIGDDVYA NGEKIDSPHR PALDALASNI ALTAENFGDA LEDPSFLAML
AALVNSGYWF FEG
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