| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1994 |
|---|
| Symbol | purB |
|---|
| ID | 6146250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 2014524 |
|---|
| End bp | 2015894 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641616870 |
|---|
| Product | adenylosuccinate lyase |
|---|
| Protein accession | YP_001744046 |
|---|
| Protein GI | 170682479 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0015] Adenylosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.922086 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAT CCTCACTGAC CGCCGTTTCC CCTGTCGATG GACGCTACGG CGATAAAGTC
AGCGCGCTGC GCGGGATTTT CAGCGAATAT GGTTTGCTGA AATTCCGTGT ACAAGTTGAA
GTACGTTGGC TGCAAAAACT GGCCGCGCAC GCAGCGATCA AGGAAGTTCC TGCTTTTGCT
GCCGACGCAA TCGGTTACCT TGATGCAATT GTCGCCAGTT TCAGCGAAGA AGATGCCGCA
CGCATCAAAA CCATCGAGCG TACCACTAAC CACGACGTTA AAGCGGTTGA GTATTTCCTG
AAAGAAAAAG TGGCGGAGAT CCCGGAACTG CACGCGGTTT CTGAATTCAT CCACTTTGCC
TGTACTTCGG AAGATATCAA TAACCTCTCC CACGCATTAA TGCTGAAAAC CGCGCGTGAT
GAAGTGATCC TGCCGTACTG GCGTCAACTG ATTGATGGCA TTAAAGATCT CGCCGCTCAG
TACCGCGATA TCCCGCTGCT GTCCCGTACC CACGGTCAGC CAGCCACGCC GTCAACCATC
GGTAAAGAGA TGGCTAACGT CGCCTACCGT ATGGAGCGCC AGTACCGCCA GCTTAACCAG
GTGGAGATCC TCGGCAAAAT CAACGGTGCG GTCGGTAACT ATAACGCCCA CATCGCCGCT
TACCCGGAAG TTGACTGGCA TCAGTTCAGC GAAGAGTTCG TCACCTCGCT GGGTATTCAG
TGGAACCCGT ACACCACCCA GATCGAACCG CACGACTACA TTGCCGAACT GTTTGATTGC
GTTGCGCGCT TCAACACCAT TCTGATCGAC TTTGACCGTG ACGTCTGGGG TTATATCGCC
CTTAACCACT TCAAACAGAA AACCATTGCT GGTGAGATTG GTTCTTCCAC CATGCCGCAT
AAAGTTAACC CGATCGACTT CGAAAACTCC GAAGGAAACC TGGGCCTTTC CAACGCGGTA
TTGCAGCACC TGGCAAGCAA ACTGCCAGTT TCCCGCTGGC AGCGTGACCT GACCGACTCC
ACCGTGCTGC GTAACCTCGG CGTGGGTATC GGTTATGCGC TGATTGCGTA TCAATCCACC
CTGAAAGGCG TGAGCAAACT GGAAGTGAAC CGTGGCCATC TGCTGGATGA ACTGGATCAC
AACTGGGAAG TGCTGGCTGA GCCAATCCAG ACAGTTATGC GTCGCTATGG CATCGAAAAA
CCGTACGAGA AGCTGAAAGA GCTGACTCGC GGTAAGCGCG TTGACGCCGA AGGCATGAAG
CAGTTTATCG ACGGTCTGGC GCTGCCGGAA GAAGAGAAAG CCCGCCTTAA AGCGATGACG
CCGGCAAACT ACATTGGTCG CGCCATCACC ATGGTTGATG AGCTGAAATA A
|
|---|
| Protein sequence | MELSSLTAVS PVDGRYGDKV SALRGIFSEY GLLKFRVQVE VRWLQKLAAH AAIKEVPAFA
ADAIGYLDAI VASFSEEDAA RIKTIERTTN HDVKAVEYFL KEKVAEIPEL HAVSEFIHFA
CTSEDINNLS HALMLKTARD EVILPYWRQL IDGIKDLAAQ YRDIPLLSRT HGQPATPSTI
GKEMANVAYR MERQYRQLNQ VEILGKINGA VGNYNAHIAA YPEVDWHQFS EEFVTSLGIQ
WNPYTTQIEP HDYIAELFDC VARFNTILID FDRDVWGYIA LNHFKQKTIA GEIGSSTMPH
KVNPIDFENS EGNLGLSNAV LQHLASKLPV SRWQRDLTDS TVLRNLGVGI GYALIAYQST
LKGVSKLEVN RGHLLDELDH NWEVLAEPIQ TVMRRYGIEK PYEKLKELTR GKRVDAEGMK
QFIDGLALPE EEKARLKAMT PANYIGRAIT MVDELK
|
|---|
| |