Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1986 |
Symbol | |
ID | 6143267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2006236 |
End bp | 2007447 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641616862 |
Product | BLUF/cyclic diguanylate phosphodiesterase domain-containing protein |
Protein accession | YP_001744038 |
Protein GI | 170680510 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.758889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTACCA CCCTTATTTA TCGTAGCCAT ATACGTGACG ACGAACCTGT CAAAAAAATC GAAGAAATGG TTTCGATAGC AAATCGCAGG AACATGCAGT CTGACGTAAC AGGGATCTTA CTGTTTAATG GTTCTCATTT TTTCCAGCTT CTGGAAGGTC CGGAAGAACA GGTTAAAATG ATATATCGGG CTATATGCCA GGATCCACGG CACTATAATA TTGTTGAGCT GATGTGCGAT TACGCGCCTG CTCGCCGTTT TGGCAAAGCG GGAATGGAAT TATTTGATTT GCGCCTGCAC GAGCGAGATG ACGTTTTACA GGCCGTATTC GACAAAGGCA CATCAAAATT TCAGCTAACT TATGATGACA GAGCGCTACA ATTTTTTCGT ACTTTTGTCC TTGCAACCGA ACAAGCAACC TATTTCGAGA TCCCTGCCGA AGACTCCTGG CTTTTTATCG CTGACGGATC TGATAAAGAA CTTGATTCCT GTACCCTTTC ACCAACTATA AATGACCACT TTGCCTTTCA TCCTATTGTC GATCCCTTAT CGCGGCGGAT AATCGCTTTT GAAGCCATTG TGCAAAAAAA TGAAGATAGC CCATCAGCTA TAGCGGTTGG GCAGCGTAAA GACGGGGAAA TCTACAAAGC GGATCTCAAA AGTAAGGCGC TTGCATTCGC GATGGCACAC GCACTTGAGC TCGGTGATAA AATGATTTCA ATCAATCTAT TACCTATGAC CCTGGTTAAC GAACCTGACG CAGTCTCTTT TTTACTTGAT GAAATAAAGG CCAATGCTCT GGTGCCTGAA CAAATCATCG TTGAATTTAC TGAAAGTGAA GTCATATCTC GGTTTGATGA GTTTGCAGAA GCGATTAAAT CGCTTAAGGC TGCCGGTATC AGTGTAGCAA TTGATCATTT TGGCGCAGGT TTTGCCGGTT TGTTACTCCT GTCACGCTTC CAGCCTGACA GAATTAAAAT CAGTCAGGAA TTGATTACCA ATGTTCATAA AAGCGGGCCA CGGCAGGCAA TTATTCAAGC GATCATAAAA TGCTGTACAT CACTTGAAAT TCAAGTCTCT GCTATGGGTG TGACAACACC AGAAGAGTGG ATGTGGCTTG AATCTGCAGG AATTGAGATG TTTCAGGGAG ATCTGTTTGC GAAAGCTAAA TTGAATGGTA TCCCTTCAGT TGCGTGGCCG GAGAAAAAAT AA
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Protein sequence | MLTTLIYRSH IRDDEPVKKI EEMVSIANRR NMQSDVTGIL LFNGSHFFQL LEGPEEQVKM IYRAICQDPR HYNIVELMCD YAPARRFGKA GMELFDLRLH ERDDVLQAVF DKGTSKFQLT YDDRALQFFR TFVLATEQAT YFEIPAEDSW LFIADGSDKE LDSCTLSPTI NDHFAFHPIV DPLSRRIIAF EAIVQKNEDS PSAIAVGQRK DGEIYKADLK SKALAFAMAH ALELGDKMIS INLLPMTLVN EPDAVSFLLD EIKANALVPE QIIVEFTESE VISRFDEFAE AIKSLKAAGI SVAIDHFGAG FAGLLLLSRF QPDRIKISQE LITNVHKSGP RQAIIQAIIK CCTSLEIQVS AMGVTTPEEW MWLESAGIEM FQGDLFAKAK LNGIPSVAWP EKK
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