Gene EcSMS35_1971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1971 
Symbol 
ID6145238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1994242 
End bp1994643 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content43% 
IMG OID641616847 
Productpre-peptidase C-terminal domain-containing protein 
Protein accessionYP_001744023 
Protein GI170680809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000018944 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA AGGGCATCAG TAAGGCTGTA TTGTTACTTG CACTGCTAAC CTCCACGAGC 
TTTGCTGCGG GTAAGAATGT CAATGTTGAG TTCAGAAAAG GCCATAGCAG CGCTCAGTAC
TCCGGCGAAA TAAAGGGATA CGATTACGAT ACATATACCT TCTATGCCAA AAAAGGTCAG
AAAGTGCATG TGAGTATCTC TAATGAAGGC GCTGATACTT ACCTCTTCGG GCCAGGAATC
GATGATTCTG TTGATTTATC CAGATATTCC CCAGAACTCG ATAGTCACGG ACAATACTCA
CTCCCTGCTT CTGGCAAATA TGAGCTGCGA GTGCTGCAAA CCCGAAACGA CGCCCGTAAA
AACAAAACTA AAAAATATAA CGTCGATATT CAAATTAAGT AA
 
Protein sequence
MKIKGISKAV LLLALLTSTS FAAGKNVNVE FRKGHSSAQY SGEIKGYDYD TYTFYAKKGQ 
KVHVSISNEG ADTYLFGPGI DDSVDLSRYS PELDSHGQYS LPASGKYELR VLQTRNDARK
NKTKKYNVDI QIK