| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1967 |
|---|
| Symbol | hlyE |
|---|
| ID | 6143071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1991319 |
|---|
| End bp | 1992230 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641616843 |
|---|
| Product | hemolysin E |
|---|
| Protein accession | YP_001744019 |
|---|
| Protein GI | 170682110 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000212688 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.94466 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAA TCGTTGCAGA TAAAACGGTA GAGGTAGTTA AAAACGCAAT CGAAACCGCA
GATGGAGCAT TAGATCTTTA TAATAAATAT CTCGATCAGG TCATCCCCTG GCAGACCTTT
GATGAAACCA TAAAAGAGTT AAGTCGCTTT AAACAGGAGT ATTCACAGGC AGCCTCCGTT
TTAGTTGGCG ATATTAAAAC CTTACTTATG GATAGCCAGG ATAAGTATTT TGAAGCAACC
CAAACAGTGT ATGAATGGTG TGGTGTTGCG ACGCAATTGC TCGCAGCGTA TATTTTGCTA
TTTGATGAGT ACAATGAGAA GAAAGCATCC GCCCAGAAAG ACATTCTCAT TAAGGTACTG
GATGACGGTA TCACGAAGCT GAATGAAGCG CAAAAATCCC TGCTGGTAAG CTCACAAAGT
TTCAACAACG CTTCCGGGAA ACTGCTGGCG TTAGATAGCC AGTTAACCAA TGATTTTTCA
GAAAAAAGCA GCTATTTCCA GTCACAGGTA GATAAAATCA GGAAGGAAGC GTATGCCGGT
GCCGCAGCCG GTGTCGTCGC CGGTCCATTT GGTTTAATCA TTTCCTATTC TATTGCTGCG
GGCGTAGTTG AAGGGAAACT GATTCCAGAA TTGAAGAACA AGTTAAAATC TGTGCAGAGT
TTCTTTACCA CCCTGTCTAA CACGGTTAAA CAAGCGAATA AAGATATCGA TGCCGCCAAA
TTGAAATTAA CCACCGAAAT AGCCGCCATC GGGGAGATAA AAACGGAAAC TGAAACAACC
AGATTCTACG TTGATTATGA TGATTTAATG CTTTCTTTGC TAAAAGAAGC GGCAAAAAAA
ATGATTAACA CCTGTAATGA GTATCAGAAA AGACACGGTA AGAAGACACT CTTTGAGGTA
CCTGAAGTCT GA
|
|---|
| Protein sequence | MTEIVADKTV EVVKNAIETA DGALDLYNKY LDQVIPWQTF DETIKELSRF KQEYSQAASV
LVGDIKTLLM DSQDKYFEAT QTVYEWCGVA TQLLAAYILL FDEYNEKKAS AQKDILIKVL
DDGITKLNEA QKSLLVSSQS FNNASGKLLA LDSQLTNDFS EKSSYFQSQV DKIRKEAYAG
AAAGVVAGPF GLIISYSIAA GVVEGKLIPE LKNKLKSVQS FFTTLSNTVK QANKDIDAAK
LKLTTEIAAI GEIKTETETT RFYVDYDDLM LSLLKEAAKK MINTCNEYQK RHGKKTLFEV
PEV
|
|---|
| |