| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1966 |
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| Symbol | umuD |
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| ID | 6147341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1990528 |
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| End bp | 1990947 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641616842 |
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| Product | DNA polymerase V subunit UmuD |
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| Protein accession | YP_001744018 |
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| Protein GI | 170683779 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000484403 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGTTTA TCAAGCCTGC GGATCTCCGC GAAATTGTGA CTTTTCCGCT ATTTAGCGAT
CTTGTTCAGT GTGGCTTTCC TTCACCGGCC GCAGATTACA TTGAACAGCG CATCGATCTG
AATCAACTGT TGATCCAGCA TCCCAGCGCG ACTTACTTCG TCAAAGCAAG TGGTGATTCT
ATGATTGATG GTGGAATTAG TGACGGTGAT TTACTGATTG TCGATAGCGC TATTACCGCC
AGCCATGGTG ATATTGTCAT CGCTGCTGTT GACGGCGAGT TTACGGTGAA AAAATTGCAA
CTACGCCCGA CTGTACAGCT TATTCCCATG AACAGTGCGT ACTCGCCCAT TACCATCAGT
AGCGAAGATA CGCTGGATGT CTTTGGTGTG GTGATCCACG TCGTTAAGGC GATGCGCTGA
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| Protein sequence | MLFIKPADLR EIVTFPLFSD LVQCGFPSPA ADYIEQRIDL NQLLIQHPSA TYFVKASGDS
MIDGGISDGD LLIVDSAITA SHGDIVIAAV DGEFTVKKLQ LRPTVQLIPM NSAYSPITIS
SEDTLDVFGV VIHVVKAMR
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