Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1964 |
Symbol | dsbB |
ID | 6144639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1988684 |
End bp | 1989214 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641616840 |
Product | disulfide bond formation protein B |
Protein accession | YP_001744016 |
Protein GI | 170679961 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1495] Disulfide bond formation protein DsbB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000143241 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.740746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGAT TTTTGAACCA ATGTTCACAA GGCCGGGGCG CGTGGCTGTT GATGGCGTTT ACTGCTCTGG CACTGGAACT GACGGCGCTG TGGTTCCAGC ATGTGATGTT ACTGAAACCT TGCGTGCTCT GTATTTATGA ACGCTGCGCA TTATTCGGCG TTCTGGGTGC TGCGCTGATT GGCGCGATCG CCCCAAAAAC GCCACTGCGT TATGTAGCGA TGGTTATCTG GTTGTATAGT GCGTTCCGCG GTGTGCAGTT AACTTACGAG CACACCATGC TTCAGCTCTA TCCTTCGCCG TTTGCCACCT GTGATTTTAT GGTTCGTTTC CCGGAATGGC TGCCGCTGGA TAAATGGGTG CCGCAAGTGT TTGTCGCCTC TGGCGATTGT GCCGAGCGTC AGTGGGATTT TTTAGGTCTG GAAATGCCGC AGTGGTTGCT CGGTATTTTT ATCGCTTACC TGATTGTCGC GGTGCTGGTG GTGATTTCCC AGCCGTTTAA AGCGAAAAAA CGTGACCTGT TCGGTCGCTA A
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Protein sequence | MLRFLNQCSQ GRGAWLLMAF TALALELTAL WFQHVMLLKP CVLCIYERCA LFGVLGAALI GAIAPKTPLR YVAMVIWLYS AFRGVQLTYE HTMLQLYPSP FATCDFMVRF PEWLPLDKWV PQVFVASGDC AERQWDFLGL EMPQWLLGIF IAYLIVAVLV VISQPFKAKK RDLFGR
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