| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1956 |
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| Symbol | ldcA |
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| ID | 6147279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1976792 |
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| End bp | 1977706 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641616832 |
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| Product | L,D-carboxypeptidase A |
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| Protein accession | YP_001744008 |
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| Protein GI | 170683906 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0449281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.173901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCTGT TTCACTTAAT TGCCCCATCG GGTTACTGCA TTAAACAGCA CGCCGCGCTG
CGTGGTATCC AGCGCCTTAC CGACGCGGGG CATCAGGTCA ATAACGTCGA GGTTATTGCC
CGTCGTTGTG AGCGTTTTGC GGGTACGGAA ACGGAGCGTC TGGAAGATCT CAATTCCCTT
GCCAGACTGA CCACCCCCAA CACCATCGTG CTGGCTGTAC GCGGCGGTTA CGGTGCCAGT
CGTTTACTGG CAGATATTGA CTGGCAGGCA CTAGTGGCTC GCCAACAACA TGACCCGTTG
CTCATTTGCG GACATAGCGA TTTTACCGCC ATTCAGTGCG GTCTTCTGGC GCATGGCAAT
GTCATCACCT TTAGCGGCCC CATGCTGGTA GCAAACTTTG GCGCGGATGA ACTGAACGCC
TTTACCGAGC ACCATTTCTG GCTGGCGTTA CGCAATGAAA CCTTCACCAT TGAATGGCAA
GGGGAAGGCC CGACATGTCA GACCGAAGGC ACGTTATGGG GAGGCAATCT CGCGATGCTG
ATTTCACTGA TTGGTACACC GTGGATGCCG CAAATCGAAA ACGGTATTCT GGTGCTGGAA
GATATTAACG AGCATCCTTT CCGCGTCGAA CGTATGCTGT TGCAGCTCTA TCATGCTGGA
ATTTTGCCAC GTCAGAAGGC GATTATTCTC GGTAGCTTTA GCGGCAGCAC GCCCAATGAT
TATGACGCAG GTTACAACCT GGAGTCAGTG TACGCGTTTT TGCGTTCCCG CCTGTCGACT
CCACTCATTA CCGGCCTCGA TTTTGGTCAT GAACAACGTA CGGTTACGCT GCCGTTGGGC
GCACATGCCA TTCTTAATAA CACCCACGAA GGCACTCAGT TGACGATTAA CGGTCATCCT
GTTCTTAAAA TGTAA
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| Protein sequence | MSLFHLIAPS GYCIKQHAAL RGIQRLTDAG HQVNNVEVIA RRCERFAGTE TERLEDLNSL
ARLTTPNTIV LAVRGGYGAS RLLADIDWQA LVARQQHDPL LICGHSDFTA IQCGLLAHGN
VITFSGPMLV ANFGADELNA FTEHHFWLAL RNETFTIEWQ GEGPTCQTEG TLWGGNLAML
ISLIGTPWMP QIENGILVLE DINEHPFRVE RMLLQLYHAG ILPRQKAIIL GSFSGSTPND
YDAGYNLESV YAFLRSRLST PLITGLDFGH EQRTVTLPLG AHAILNNTHE GTQLTINGHP
VLKM
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